RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 C2orf73Q8N5S3 287 aaPredicted RBP23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 VPS39Q96JC1 886 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 CPNE1Q99829 537 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 SPHK1Q9NYA1 384 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 ACTR10Q9NZ32 417 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 OR6C2Q9NZP2 312 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 PIPSLA2A3N6 862 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 TLCD2A6NGC4 264 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 ARHGEF33A8MVX0 844 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 MATN2O00339 956 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 PRDX3P30048 256 aaKnown RBP23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 TBC1D25Q3MII6 688 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 LINC01555Q8NAE3 123 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 KDF1Q8NAX2 398 aaPredicted RBP23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 KLHL6Q8WZ60 621 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 CD180Q99467 661 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 SLC39A10Q9ULF5 831 aa23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 MTO1Q9Y2Z2 717 aaKnown RBP23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 MAP1BP46821 2468 aaKnown RBP23.1■■□□□ 1.29
UBE2E3-202ENST00000410062 APC2O95996 2303 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 TMEM8BA6NDV4 472 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 CDRT15L2A8MXV6 281 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 C2orf74A8MZ97 194 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 RASGRF2O14827 1237 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 FAM155BO75949 473 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 ACSL3O95573 720 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 GP5P40197 560 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 RGS4P49798 205 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 BMPERQ8N8U9 685 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 MAGEC3Q8TD91 643 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 ASB11Q8WXH4 323 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 UBXN4Q92575 508 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 USP7Q93009 1102 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 PMEPA1Q969W9 287 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 LINGO1Q96FE5 620 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 RBBP8Q99708 897 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 THSD1Q9NS62 852 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 SEMA5BQ9P283 1151 aa23.09■■□□□ 1.29
UBE2E3-202ENST00000410062 EIF3FO00303 357 aaPredicted RBP23.08■■□□□ 1.29
UBE2E3-202ENST00000410062 CATP04040 527 aaKnown RBP23.08■■□□□ 1.29
UBE2E3-202ENST00000410062 CDH3P22223 829 aa23.08■■□□□ 1.29
UBE2E3-202ENST00000410062 TAS2R39P59534 338 aa23.08■■□□□ 1.29
UBE2E3-202ENST00000410062 SH3BP2P78314 561 aa23.08■■□□□ 1.29
UBE2E3-202ENST00000410062 ZNF460Q14592 562 aa23.08■■□□□ 1.29
UBE2E3-202ENST00000410062 TAX1BP1Q86VP1 789 aa23.08■■□□□ 1.29
UBE2E3-202ENST00000410062 ZNF578Q96N58 590 aaPredicted RBP23.08■■□□□ 1.29
UBE2E3-202ENST00000410062 SLC39A1Q9NY26 324 aa23.08■■□□□ 1.29
UBE2E3-202ENST00000410062 TAF4O00268 1085 aa23.07■■□□□ 1.28
UBE2E3-202ENST00000410062 TLX3O43711 291 aaPredicted RBP23.07■■□□□ 1.28
UBE2E3-202ENST00000410062 UGT2B7P16662 529 aa23.07■■□□□ 1.28
UBE2E3-202ENST00000410062 PEBP1P30086 187 aaKnown RBP23.07■■□□□ 1.28
UBE2E3-202ENST00000410062 PHBP35232 272 aa23.07■■□□□ 1.28
UBE2E3-202ENST00000410062 ERVPABLB-1P60509 514 aa23.07■■□□□ 1.28
UBE2E3-202ENST00000410062 IL2P60568 153 aa23.07■■□□□ 1.28
UBE2E3-202ENST00000410062 TMEM207Q6UWW9 146 aa23.07■■□□□ 1.28
UBE2E3-202ENST00000410062 CEP97Q8IW35 865 aa23.07■■□□□ 1.28
UBE2E3-202ENST00000410062 GSPT2Q8IYD1 628 aaKnown RBP23.07■■□□□ 1.28
UBE2E3-202ENST00000410062 DENND1AQ8TEH3 1009 aa23.07■■□□□ 1.28
UBE2E3-202ENST00000410062 MRRFQ96E11 262 aaKnown RBP23.07■■□□□ 1.28
UBE2E3-202ENST00000410062 OR2A14Q96R47 310 aa23.07■■□□□ 1.28
UBE2E3-202ENST00000410062 SIDT1Q9NXL6 827 aaKnown RBP23.07■■□□□ 1.28
UBE2E3-202ENST00000410062 ADAMTS20P59510 1910 aa23.07■■□□□ 1.28
UBE2E3-202ENST00000410062 SLC9B1P1A6NJY1 282 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 ISM1B1AKI9 464 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 B4E171 279 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 C9orf172C9J069 976 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 GFYI3L273 518 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 PRAMEF10O60809 474 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 TSPAN12O95859 305 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 NELFEP18615 380 aaKnown RBP23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 SLC5A2P31639 672 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 TSPAN7P41732 249 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 MLLT3P42568 568 aaPredicted RBP23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 MC2RQ01718 297 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 KCNAB1Q14722 419 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 LRRC8EQ6NSJ5 796 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 SPESP1Q6UW49 350 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 UBE2R2Q712K3 238 aaPredicted RBP23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 TRIM73Q86UV7 250 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 PROSER1Q86XN7 944 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 RASGRP3Q8IV61 690 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 MYO1HQ8N1T3 1032 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 OR9A1PQ8NGU1 263 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 OR2L8Q8NGY9 312 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 FLVCR1-AS1Q8TAF5 88 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 SLC41A2Q96JW4 573 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 TAAR9Q96RI9 348 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 CTRCQ99895 268 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 RAB11FIP5Q9BXF6 653 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 TWSG1Q9GZX9 223 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 KLHL25Q9H0H3 589 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 CAB39LQ9H9S4 337 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 C1GALT1Q9NS00 363 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 FOXJ2Q9P0K8 574 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 ADAMTS6Q9UKP5 1117 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 ACACAQ13085 2346 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 LAMA5O15230 3695 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 MYO1CO00159 1063 aa23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 SYF2O95926 243 aaKnown RBP23.06■■□□□ 1.28
UBE2E3-202ENST00000410062 FAM153BP0C7A2 387 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms