RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 ATG9BQ674R7 924 aa15.51■□□□□ 0.07
HOXD3-202ENST00000410016 GCNT7Q6ZNI0 430 aa15.51■□□□□ 0.07
HOXD3-202ENST00000410016 MICU2Q8IYU8 434 aa15.51■□□□□ 0.07
HOXD3-202ENST00000410016 MBOAT4Q96T53 435 aa15.51■□□□□ 0.07
HOXD3-202ENST00000410016 ABCB8Q9NUT2 735 aa15.51■□□□□ 0.07
HOXD3-202ENST00000410016 KCTD5Q9NXV2 234 aa15.51■□□□□ 0.07
HOXD3-202ENST00000410016 USE1Q9NZ43 259 aa15.51■□□□□ 0.07
HOXD3-202ENST00000410016 FOXD2O60548 495 aaPredicted RBP15.5■□□□□ 0.07
HOXD3-202ENST00000410016 CREG1O75629 220 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 CD70P32970 193 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 PTPN5P54829 565 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 CLDN8P56748 225 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 PTSQ03393 145 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 CDKL4Q5MAI5 379 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 FKBP9P1Q75LS8 142 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 TCEAL8Q8IYN2 117 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 TERB1Q8NA31 727 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 SGCDQ92629 289 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 SCRN2Q96FV2 425 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 ING2Q9H160 280 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 KLHL42Q9P2K6 505 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 MBD1Q9UIS9 605 aaPredicted RBP15.5■□□□□ 0.07
HOXD3-202ENST00000410016 MAN2B2Q9Y2E5 1009 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 SCN5AQ14524 2016 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 NOBOXO60393 691 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 ERN1O75460 977 aaKnown RBP15.5■□□□□ 0.07
HOXD3-202ENST00000410016 SEC14L2O76054 403 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 KRT6AP02538 564 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 KRT6BP04259 564 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 CD247P20963 164 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 KRT6CP48668 564 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 PLEKHG6Q3KR16 790 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 ATP13A5Q4VNC0 1218 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 TTC23Q5W5X9 447 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 RFLNAQ6ZTI6 216 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 TMEM179BQ7Z7N9 219 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 SVOPLQ8N434 492 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 PAF1Q8N7H5 531 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 OR2AP1Q8NGE2 309 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 NETO1Q8TDF5 533 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 FAM162AQ96A26 154 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 CPPED1Q9BRF8 314 aaPredicted RBP15.5■□□□□ 0.07
HOXD3-202ENST00000410016 ABCG8Q9H221 673 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 KCNH6Q9H252 994 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 PLGRKTQ9HBL7 147 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 ARL15Q9NXU5 204 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 ZDHHC3Q9NYG2 299 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 TMEM9Q9P0T7 183 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 AP3M1Q9Y2T2 418 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 INSL5Q9Y5Q6 135 aa15.5■□□□□ 0.07
HOXD3-202ENST00000410016 LAMA2P24043 3122 aaKnown RBP15.5■□□□□ 0.07
HOXD3-202ENST00000410016 KCNE1BA0A087WTH5 132 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 IGSF6O95976 241 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 EEF1B2P24534 225 aaKnown RBP15.49■□□□□ 0.07
HOXD3-202ENST00000410016 TACR1P25103 407 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 SERPINA4P29622 427 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 EPHB3P54753 998 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 RPS14P62263 151 aaKnown RBP15.49■□□□□ 0.07
HOXD3-202ENST00000410016 MYBPC3Q14896 1274 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 RBM48Q5RL73 367 aaKnown RBP15.49■□□□□ 0.07
HOXD3-202ENST00000410016 MPP7Q5T2T1 576 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 LRRC66Q68CR7 880 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 LAIR2Q6ISS4 152 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 TTC23LQ6PF05 361 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 TPRG1Q6ZUI0 275 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 R3HCC1LQ7Z5L2 792 aaKnown RBP15.49■□□□□ 0.07
HOXD3-202ENST00000410016 CROCCP3Q8IVE0 287 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 BBS7Q8IWZ6 715 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 CHPFQ8IZ52 775 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 C8orf59Q8N0T1 100 aaPredicted RBP15.49■□□□□ 0.07
HOXD3-202ENST00000410016 DNAJB8Q8NHS0 232 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 FIBINQ8TAL6 211 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 TANKQ92844 425 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 ECHDC3Q96DC8 303 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 HHIPQ96QV1 700 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 FANCEQ9HB96 536 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 HPS4Q9NQG7 708 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 PPIL1Q9Y3C6 166 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 ZNF106Q9H2Y7 1883 aaKnown RBP15.49■□□□□ 0.07
HOXD3-202ENST00000410016 IGLV3-16A0A075B6K0 115 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 FAM220BPB1ANY3 271 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 ABCB7O75027 752 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 B3GALT4O96024 378 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 IL1RNP18510 177 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 NEK2P51955 445 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 PPP1R8Q12972 351 aaKnown RBP15.49■□□□□ 0.07
HOXD3-202ENST00000410016 GBX1Q14549 363 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 BROXQ5VW32 411 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 HTR3DQ70Z44 454 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 RBM23Q86U06 439 aaKnown RBP15.49■□□□□ 0.07
HOXD3-202ENST00000410016 AUTS2Q8WXX7 1259 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 HDAC2Q92769 488 aaKnown RBP15.49■□□□□ 0.07
HOXD3-202ENST00000410016 HSPBAP1Q96EW2 488 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 COPS8Q99627 209 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 RBM4BQ9BQ04 359 aaKnown RBP15.49■□□□□ 0.07
HOXD3-202ENST00000410016 INPP5KQ9BT40 448 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 RBM4Q9BWF3 364 aaKnown RBP15.49■□□□□ 0.07
HOXD3-202ENST00000410016 SLC12A9Q9BXP2 914 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 MAGIXQ9H6Y5 334 aa15.49■□□□□ 0.07
HOXD3-202ENST00000410016 PARVBQ9HBI1 364 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms