RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 MAIP1Q8WWC4 291 aa14.01□□□□□ -0.17
MCF2L-210ENST00000409954 C1orf54Q8WWF1 131 aa14.01□□□□□ -0.17
MCF2L-210ENST00000409954 NACC2Q96BF6 587 aa14.01□□□□□ -0.17
MCF2L-210ENST00000409954 FER1L6-AS2Q96M78 137 aa14.01□□□□□ -0.17
MCF2L-210ENST00000409954 NRTNQ99748 197 aa14.01□□□□□ -0.17
MCF2L-210ENST00000409954 SPRTNQ9H040 489 aaPredicted RBP14.01□□□□□ -0.17
MCF2L-210ENST00000409954 ANKMY1Q9P2S6 941 aa14.01□□□□□ -0.17
MCF2L-210ENST00000409954 GPN3Q9UHW5 284 aaPredicted RBP14.01□□□□□ -0.17
MCF2L-210ENST00000409954 SRPK3Q9UPE1 567 aa14.01□□□□□ -0.17
MCF2L-210ENST00000409954 TCAF1Q9Y4C2 921 aa14.01□□□□□ -0.17
MCF2L-210ENST00000409954 MRFAP1Q9Y605 127 aa14.01□□□□□ -0.17
MCF2L-210ENST00000409954 CAPN6Q9Y6Q1 641 aa14.01□□□□□ -0.17
MCF2L-210ENST00000409954 H3BMH7 237 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 PRMT5O14744 637 aaPredicted RBP14□□□□□ -0.17
MCF2L-210ENST00000409954 KLF7O75840 302 aaPredicted RBP14□□□□□ -0.17
MCF2L-210ENST00000409954 SLCO2B1O94956 709 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 CD9P21926 228 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 GRIA1P42261 906 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 GABRA4P48169 554 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 TTPAP49638 278 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 RAB28P51157 221 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 ARSFP54793 590 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 SRSF1Q07955 248 aaKnown RBP eCLIP14□□□□□ -0.17
MCF2L-210ENST00000409954 CPZQ66K79 652 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 DRICH1Q6PGQ1 229 aaPredicted RBP14□□□□□ -0.17
MCF2L-210ENST00000409954 FAM198BQ6UWH4 519 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 UNC5DQ6UXZ4 953 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 ZNF534Q76KX8 674 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 SPC24Q8NBT2 197 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 GALNT11Q8NCW6 608 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 PPHLN1Q8NEY8 458 aaKnown RBP14□□□□□ -0.17
MCF2L-210ENST00000409954 FLVCR1-AS1Q8TAF5 88 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 PTERQ96BW5 349 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 ZNF778Q96MU6 729 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 NDC1Q9BTX1 674 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 CHRAC1Q9NRG0 131 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 TXLNGQ9NUQ3 528 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 SPHK1Q9NYA1 384 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 C5AR2Q9P296 337 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 IFT80Q9P2H3 777 aaPredicted RBP14□□□□□ -0.17
MCF2L-210ENST00000409954 SLC2A6Q9UGQ3 507 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 ZKSCAN5Q9Y2L8 839 aa14□□□□□ -0.17
MCF2L-210ENST00000409954 UBR5O95071 2799 aaPredicted RBP13.99□□□□□ -0.17
MCF2L-210ENST00000409954 PEX12O00623 359 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 ZNF185O15231 689 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 CD3EAPO15446 510 aaKnown RBP13.99□□□□□ -0.17
MCF2L-210ENST00000409954 ZSCAN9O15535 394 aaPredicted RBP13.99□□□□□ -0.17
MCF2L-210ENST00000409954 FKBP9O95302 570 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 S1PR4O95977 384 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 CBSLP0DN79 551 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 PIM1P11309 404 aaPredicted RBP13.99□□□□□ -0.17
MCF2L-210ENST00000409954 AOAHP28039 575 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 RPL22P35268 128 aaKnown RBP13.99□□□□□ -0.17
MCF2L-210ENST00000409954 CBSP35520 551 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 CDK16Q00536 496 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 CHAF1BQ13112 559 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 SNX1Q13596 522 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 ZIC1Q15915 447 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 ZC3H12BQ5HYM0 836 aaKnown RBP13.99□□□□□ -0.17
MCF2L-210ENST00000409954 MEI1Q5TIA1 1274 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 NAPRTQ6XQN6 538 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 MICALCLQ6ZW33 695 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 TRIM73Q86UV7 250 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 LRRC6Q86X45 466 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 MPP5Q8N3R9 675 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 FDCSPQ8NFU4 85 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 GSDMBQ8TAX9 411 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 CPT1CQ8TCG5 803 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 DLG3Q92796 817 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 ZUFSPQ96AP4 578 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 GBP5Q96PP8 586 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 PANX3Q96QZ0 392 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 SMAD5Q99717 465 aaKnown RBP13.99□□□□□ -0.17
MCF2L-210ENST00000409954 IL22Q9GZX6 179 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 EIF2B3Q9NR50 452 aaKnown RBP13.99□□□□□ -0.17
MCF2L-210ENST00000409954 HOMER3Q9NSC5 361 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 CATSPERZQ9NTU4 200 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 INTS7Q9NVH2 962 aaKnown RBP13.99□□□□□ -0.17
MCF2L-210ENST00000409954 GPR83Q9NYM4 423 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 BFARQ9NZS9 450 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 SLC39A10Q9ULF5 831 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 CDYLQ9Y232 598 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 MAP4K5Q9Y4K4 846 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 ZNF106Q9H2Y7 1883 aaKnown RBP13.99□□□□□ -0.17
MCF2L-210ENST00000409954 SEC16AO15027 2179 aa13.99□□□□□ -0.17
MCF2L-210ENST00000409954 PFDN6O15212 129 aa13.98□□□□□ -0.17
MCF2L-210ENST00000409954 NDUFS3O75489 264 aa13.98□□□□□ -0.17
MCF2L-210ENST00000409954 ETS1P14921 441 aa13.98□□□□□ -0.17
MCF2L-210ENST00000409954 FOLR3P41439 243 aa13.98□□□□□ -0.17
MCF2L-210ENST00000409954 TMED2Q15363 201 aa13.98□□□□□ -0.17
MCF2L-210ENST00000409954 NKAIN1Q4KMZ8 207 aa13.98□□□□□ -0.17
MCF2L-210ENST00000409954 YOD1Q5VVQ6 348 aaPredicted RBP13.98□□□□□ -0.17
MCF2L-210ENST00000409954 PTRHD1Q6GMV3 140 aaKnown RBP13.98□□□□□ -0.17
MCF2L-210ENST00000409954 ZNF662Q6ZS27 426 aa13.98□□□□□ -0.17
MCF2L-210ENST00000409954 SDCCAG8Q86SQ7 713 aaPredicted RBP13.98□□□□□ -0.17
MCF2L-210ENST00000409954 MCATQ8IVS2 390 aaKnown RBP13.98□□□□□ -0.17
MCF2L-210ENST00000409954 DCUN1D3Q8IWE4 304 aa13.98□□□□□ -0.17
MCF2L-210ENST00000409954 RAB42Q8N4Z0 105 aa13.98□□□□□ -0.17
MCF2L-210ENST00000409954 OR2Y1Q8NGV0 311 aa13.98□□□□□ -0.17
MCF2L-210ENST00000409954 RAD51AP1Q96B01 352 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms