RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 PISDQ9UG56 409 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 MTO1Q9Y2Z2 717 aaKnown RBP21.67■■□□□ 1.06
PTCD3-203ENST00000409783 TMEM8BA6NDV4 472 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 TLCD2A6NGC4 264 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 TAF4O00268 1085 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 MATN2O00339 956 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 RASGRF2O14827 1237 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 TNFSF15O95150 251 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 ITGA2BP08514 1039 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 CHRM5P08912 532 aaPredicted RBP21.66■■□□□ 1.06
PTCD3-203ENST00000409783 PRDX3P30048 256 aaKnown RBP21.66■■□□□ 1.06
PTCD3-203ENST00000409783 PEBP1P30086 187 aaKnown RBP21.66■■□□□ 1.06
PTCD3-203ENST00000409783 DEKP35659 375 aaKnown RBP21.66■■□□□ 1.06
PTCD3-203ENST00000409783 GP5P40197 560 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 RAB28P51157 221 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 TAS2R39P59534 338 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 ARMC6Q6NXE6 501 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 CLEC14AQ86T13 490 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 CTAGE3PQ8IX95 158 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 LMNTD1Q8N9Z9 388 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 FBXO15Q8NCQ5 510 aaPredicted RBP21.66■■□□□ 1.06
PTCD3-203ENST00000409783 SLC41A2Q96JW4 573 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 ACTR10Q9NZ32 417 aa21.66■■□□□ 1.06
PTCD3-203ENST00000409783 MAP1BP46821 2468 aaKnown RBP21.66■■□□□ 1.06
PTCD3-203ENST00000409783 KDM1AO60341 852 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 RASSF9O75901 435 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 FAM155BO75949 473 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 WISP3O95389 354 aaPredicted RBP21.65■■□□□ 1.06
PTCD3-203ENST00000409783 FAM153BP0C7A2 387 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 JMJD7P0C870 316 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 SEPHS1P49903 392 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 ILF2Q12905 390 aaKnown RBP21.65■■□□□ 1.06
PTCD3-203ENST00000409783 PRKAA1Q13131 559 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 PDAP1Q13442 181 aaKnown RBP21.65■■□□□ 1.06
PTCD3-203ENST00000409783 NAB1Q13506 487 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 TBC1D25Q3MII6 688 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 FAM153CQ494X1 144 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 FBXO38Q6PIJ6 1188 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 CEP97Q8IW35 865 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 PPM1NQ8N819 430 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 OR2L8Q8NGY9 312 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 UBXN4Q92575 508 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 DLG3Q92796 817 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 PMEPA1Q969W9 287 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 OR2A14Q96R47 310 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 GPR22Q99680 433 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 PITPNM3Q9BZ71 974 aa21.65■■□□□ 1.06
PTCD3-203ENST00000409783 AKAP7Q9P0M2 348 aaPredicted RBP21.65■■□□□ 1.06
PTCD3-203ENST00000409783 ACACAQ13085 2346 aa21.64■■□□□ 1.06
PTCD3-203ENST00000409783 PIPSLA2A3N6 862 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 GSAPA4D1B5 854 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 EFCAB7A8K855 629 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 C2orf74A8MZ97 194 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 B4E171 279 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 MYO1CO00159 1063 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 TLX3O43711 291 aaPredicted RBP21.64■■□□□ 1.05
PTCD3-203ENST00000409783 PRICKLE3O43900 615 aaPredicted RBP21.64■■□□□ 1.05
PTCD3-203ENST00000409783 MYBL2P10244 700 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 ERGP11308 486 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 NELFEP18615 380 aaKnown RBP21.64■■□□□ 1.05
PTCD3-203ENST00000409783 RBMS1P29558 406 aaKnown RBP21.64■■□□□ 1.05
PTCD3-203ENST00000409783 TSPAN7P41732 249 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 RGS4P49798 205 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 ERVPABLB-1P60509 514 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 MC2RQ01718 297 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 GRTP1Q5TC63 336 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 LRRC8EQ6NSJ5 796 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 TTC23LQ6PF05 361 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 CARFQ8N187 725 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 EIF1ADQ8N9N8 165 aaKnown RBP21.64■■□□□ 1.05
PTCD3-203ENST00000409783 MAGEC3Q8TD91 643 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 ZCCHC14Q8WYQ9 949 aaKnown RBP21.64■■□□□ 1.05
PTCD3-203ENST00000409783 LINGO1Q96FE5 620 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 ZNF578Q96N58 590 aaPredicted RBP21.64■■□□□ 1.05
PTCD3-203ENST00000409783 TXLNGYQ9BZA5 131 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 ACSS3Q9H6R3 686 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 ANKZF1Q9H8Y5 726 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 ADAMTS6Q9UKP5 1117 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 PCDHGA7Q9Y5G6 932 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 ANKRD12Q6UB98 2062 aa21.64■■□□□ 1.05
PTCD3-203ENST00000409783 C9orf172C9J069 976 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 ACSL3O95573 720 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 CATP04040 527 aaKnown RBP21.63■■□□□ 1.05
PTCD3-203ENST00000409783 UGT2B7P16662 529 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 ZNF37AP17032 561 aaPredicted RBP21.63■■□□□ 1.05
PTCD3-203ENST00000409783 PHBP35232 272 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 MAPK10P53779 464 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 ZNF460Q14592 562 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 SLMAPQ14BN4 828 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 SPESP1Q6UW49 350 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 PROSER1Q86XN7 944 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 KMT5CQ86Y97 462 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 OR9A1PQ8NGU1 263 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 HMGCLL1Q8TB92 370 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 USP7Q93009 1102 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 PDLIM5Q96HC4 596 aaKnown RBP21.63■■□□□ 1.05
PTCD3-203ENST00000409783 B3GNT4Q9C0J1 378 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 C1GALT1Q9NS00 363 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 SPATA7Q9P0W8 599 aa21.63■■□□□ 1.05
PTCD3-203ENST00000409783 TXNDC16Q9P2K2 825 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms