RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PLSCR5A0PG75 271 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 TRIM49BA6NDI0 452 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 TMEM202A6NGA9 273 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 PSMA7O14818 248 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 MAGEB2O15479 319 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 TGFB1I1O43294 461 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 ZIC3O60481 467 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 CABYRO75952 493 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 SEC14L2O76054 403 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 ASGR1P07306 291 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 SMIM10L2AP0DMW4 78 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 SMIM10L2BP0DMW5 78 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 SRCP12931 536 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 ZNF18P17022 549 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 CCNE1P24864 410 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 NMT1P30419 496 aaKnown RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 ELF1P32519 619 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 NAMPTP43490 491 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 CTCFP49711 727 aaPredicted RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 PDLIM4P50479 330 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 CASP6P55212 293 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 PEX3P56589 373 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 GTF2BQ00403 316 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 DMP1Q13316 513 aaPredicted RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 ALCAMQ13740 583 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 OASLQ15646 514 aaKnown RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 PKN2Q16513 984 aaKnown RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 USP41Q3LFD5 358 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 ZNF672Q499Z4 452 aaPredicted RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 SETMARQ53H47 684 aaPredicted RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 HERC4Q5GLZ8 1057 aaPredicted RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 CENPPQ6IPU0 288 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 CCDC70Q6NSX1 233 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 TTI2Q6NXR4 508 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 FBXL22Q6P050 247 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 FBXO46Q6PJ61 603 aaPredicted RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 CXCL17Q6UXB2 119 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 LUZP1Q86V48 1076 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 SLC35F3Q8IY50 421 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 MYOCDQ8IZQ8 938 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 PGBD5Q8N414 524 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 TMEM161BQ8NDZ6 487 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 CADM4Q8NFZ8 388 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 TCP11Q8WWU5 503 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 NELFBQ8WX92 580 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 P2RX5Q93086 422 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 TMEM143Q96AN5 459 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 DHTKD1Q96HY7 919 aaPredicted RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 DOCK7Q96N67 2140 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 ZNF385AQ96PM9 386 aaKnown RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 MAP7D2Q96T17 732 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 JPH2Q9BR39 696 aaPredicted RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 MTG1Q9BT17 334 aaPredicted RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 C1QTNF4Q9BXJ3 329 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 NFKBIZQ9BYH8 718 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 SLC25A18Q9H1K4 315 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 PCDH9Q9HC56 1237 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 POLD4Q9HCU8 107 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 SETD4Q9NVD3 440 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 TBC1D7Q9P0N9 293 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 LARSQ9P2J5 1176 aaKnown RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 CTNNAL1Q9UBT7 734 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 RWDD2AQ9UIY3 292 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 FBXO9Q9UK97 447 aaPredicted RBP4.26□□□□□ -1.73
CLK1-203ENST00000409769 CDC14AQ9UNH5 594 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 TRAF3IP3Q9Y228 551 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 ALPK3Q96L96 1907 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 RALGAPA2Q2PPJ7 1873 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 TANC1Q9C0D5 1861 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 SCN5AQ14524 2016 aa4.26□□□□□ -1.73
CLK1-203ENST00000409769 TET1Q8NFU7 2136 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 A0A0B4J293 547 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 GOLGA6L9A6NEM1 432 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 K7ENM7 598 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 DNM1LO00429 736 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 PDXKO00764 312 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 SLC16A4O15374 487 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 BCAT2O15382 392 aaPredicted RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 AP5Z1O43299 807 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 NDUFS7O75251 213 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 GCNT3O95395 438 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 ZBTB11O95625 1053 aaPredicted RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 PIGRP01833 764 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 EDN1P05305 212 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 UBL4AP11441 157 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 CCL5P13501 91 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 PSMA4P25789 261 aaKnown RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 STX2P32856 288 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 GPC3P51654 580 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 CLCN3P51790 818 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 ACLYP53396 1101 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 STX17P56962 302 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 PTENP60484 403 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 SNRPFP62306 86 aaKnown RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 RPL7AP62424 266 aaKnown RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 MYL5Q02045 173 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 LRRC63Q05C16 580 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 LAMTOR4Q0VGL1 99 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 DLG1Q12959 904 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 MYBPHQ13203 477 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms