RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 KELP23276 732 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 AK4P27144 223 aaPredicted RBP12.12□□□□□ -0.47
CHMP3-204ENST00000409727 MAOBP27338 520 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 IMPA1P29218 277 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 GGT5P36269 586 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 RPS9P46781 194 aaKnown RBP12.12□□□□□ -0.47
CHMP3-204ENST00000409727 NAA20P61599 178 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 RPL6Q02878 288 aaKnown RBP12.12□□□□□ -0.47
CHMP3-204ENST00000409727 RPA4Q13156 261 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 NAE1Q13564 534 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 UGT3A2Q3SY77 523 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 ZNF542PQ5EBM4 170 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 CDKL4Q5MAI5 379 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 SPDYAQ5MJ70 313 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 TMEM198Q66K66 360 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 TSSK4Q6SA08 328 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 LAYNQ6UX15 382 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 HID1Q8IV36 788 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 SYTL1Q8IYJ3 562 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 C2orf73Q8N5S3 287 aaPredicted RBP12.12□□□□□ -0.47
CHMP3-204ENST00000409727 C19orf60Q96EN9 201 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 C3orf30Q96M34 536 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 SLC6A18Q96N87 628 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 IL17FQ96PD4 163 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 HBEGFQ99075 208 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 NRTNQ99748 197 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 TIMM29Q9BSF4 260 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 TUBB1Q9H4B7 451 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 PRDM8Q9NQV8 689 aa12.12□□□□□ -0.47
CHMP3-204ENST00000409727 A0A1W2PPC4 97 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 FFAR3O14843 346 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 GPR42O15529 346 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 CCDC22O60826 627 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 SERPINA6P08185 405 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 HOXC4P09017 264 aaPredicted RBP12.11□□□□□ -0.47
CHMP3-204ENST00000409727 SLC6A12P48065 614 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 CCR3P51677 355 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 PKNOX1P55347 436 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 SRP54P61011 504 aaKnown RBP12.11□□□□□ -0.47
CHMP3-204ENST00000409727 DMWDQ09019 674 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 TRAF3Q13114 568 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 ALG11Q2TAA5 492 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 LRRC70Q7Z2Q7 622 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 SLC22A18ASQ8N1D0 253 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 CAMKK1Q8N5S9 505 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 CCL4L1Q8NHW4 92 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 METTL6Q8TCB7 284 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 C12orf66Q96MD2 445 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 CATSPER2Q96P56 530 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 TMEM168Q9H0V1 697 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 ACTR8Q9H981 624 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 MEAF6Q9HAF1 191 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 IMP3Q9NV31 184 aaKnown RBP12.11□□□□□ -0.47
CHMP3-204ENST00000409727 DNAJC11Q9NVH1 559 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 INTS7Q9NVH2 962 aaKnown RBP12.11□□□□□ -0.47
CHMP3-204ENST00000409727 GIMAP2Q9UG22 337 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 ACSL5Q9ULC5 683 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 RNF11Q9Y3C5 154 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 HS3ST3A1Q9Y663 406 aa12.11□□□□□ -0.47
CHMP3-204ENST00000409727 OR52A4PA6NMU1 304 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 C10orf142B7Z368 130 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 AXIN1O15169 862 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 MAP3K13O43283 966 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 DCXO43602 365 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 CHEK2O96017 543 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 THEGLP0DJG4 465 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 UROSP10746 265 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 HGFP14210 728 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 EPORP19235 508 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 IDSP22304 550 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 RABIFP47224 123 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 YPEL5P62699 121 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 DMPKQ09013 629 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 FASTKQ14296 549 aaKnown RBP12.1□□□□□ -0.47
CHMP3-204ENST00000409727 CLCA4Q14CN2 919 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 SGO1Q5FBB7 561 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 TTC23LQ6PF05 361 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 SLC30A9Q6PML9 568 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 UNC5DQ6UXZ4 953 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 YTHDF3Q7Z739 585 aaKnown RBP12.1□□□□□ -0.47
CHMP3-204ENST00000409727 ABI3BPQ7Z7G0 1075 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 THOC6Q86W42 341 aaKnown RBP12.1□□□□□ -0.47
CHMP3-204ENST00000409727 KIRREL3Q8IZU9 778 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 GBP7Q8N8V2 638 aaPredicted RBP12.1□□□□□ -0.47
CHMP3-204ENST00000409727 OR9A1PQ8NGU1 263 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 ZNF480Q8WV37 535 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 ATL1Q8WXF7 558 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 SCARF2Q96GP6 870 aaPredicted RBP12.1□□□□□ -0.47
CHMP3-204ENST00000409727 FERD3LQ96RJ6 166 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 INSM2Q96T92 566 aaPredicted RBP12.1□□□□□ -0.47
CHMP3-204ENST00000409727 MIR1-1HGQ9H1L0 117 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 SAR1AQ9NR31 198 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 SPATA6Q9NWH7 488 aaPredicted RBP12.1□□□□□ -0.47
CHMP3-204ENST00000409727 DMTF1Q9Y222 760 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 MEI4A8MW99 385 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 PRR5-ARHGAP8B1AHC4 643 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 K7ESF4 209 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 MYO1CO00159 1063 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 CLGNO14967 610 aa12.1□□□□□ -0.47
CHMP3-204ENST00000409727 HMOX2P30519 316 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms