RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 HIST1H2AGP0C0S8 130 aaPredicted RBP16.13■□□□□ 0.17
SUMO1-208ENST00000409627 MYZAPP0CAP1 466 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 ERGP11308 486 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 HIST1H2ADP20671 130 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 ALDH4A1P30038 563 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 KPNA2P52292 529 aaKnown RBP16.13■□□□□ 0.17
SUMO1-208ENST00000409627 OR1D5P58170 312 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 CDKL1Q00532 357 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 SLC18A2Q05940 514 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 ARHGAP19Q14CB8 494 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 OR4D1Q15615 310 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 TNFAIP8L3Q5GJ75 292 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 KLHL35Q6PF15 583 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 FRA10AC1Q70Z53 315 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 AMIGO1Q86WK6 493 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 RAB42Q8N4Z0 105 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 OR10G6Q8NH81 332 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 RHEBL1Q8TAI7 183 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 STAG3L4Q8TBR4 150 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 JPH3Q8WXH2 748 aaPredicted RBP16.13■□□□□ 0.17
SUMO1-208ENST00000409627 HIST1H2AHQ96KK5 128 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 PKNOX2Q96KN3 472 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 CCDC138Q96M89 665 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 PKP4Q99569 1192 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 HIST1H2AJQ99878 128 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 H2AFJQ9BTM1 129 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 SRMSQ9H3Y6 488 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 ALG9Q9H6U8 611 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 SENP1Q9P0U3 644 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 PLAGL1Q9UM63 463 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 COL27A1Q8IZC6 1860 aaPredicted RBP16.13■□□□□ 0.17
SUMO1-208ENST00000409627 ASXL3Q9C0F0 2248 aa16.13■□□□□ 0.17
SUMO1-208ENST00000409627 GOLGA6L10A6NI86 522 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 AGPSO00116 658 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 MAP2K7O14733 419 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 B4GAT1O43505 415 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 DUX1O43812 170 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 KERAO60938 352 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 GLRA3O75311 464 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 SYF2O95926 243 aaKnown RBP16.12■□□□□ 0.17
SUMO1-208ENST00000409627 TOP3BO95985 862 aaKnown RBP16.12■□□□□ 0.17
SUMO1-208ENST00000409627 PROS1P07225 676 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 RBP1P09455 135 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 CDK4P11802 303 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 KRT4P19013 534 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 HSD17B2P37059 387 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 CAPZBP47756 277 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 GLRBP48167 497 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 NOVA1P51513 510 aaKnown RBP16.12■□□□□ 0.17
SUMO1-208ENST00000409627 SQSTM1Q13501 440 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 CYP2A13Q16696 494 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 CLPPQ16740 277 aaPredicted RBP16.12■□□□□ 0.17
SUMO1-208ENST00000409627 TECRLQ5HYJ1 363 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 OOSP2Q86WS3 158 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 SRRM1Q8IYB3 904 aaKnown RBP16.12■□□□□ 0.17
SUMO1-208ENST00000409627 Q8N9G6 341 aaPredicted RBP16.12■□□□□ 0.17
SUMO1-208ENST00000409627 OR4E2Q8NGC2 313 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 OR2L8Q8NGY9 312 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 WDR48Q8TAF3 677 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 HMGCLL1Q8TB92 370 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 DENND1AQ8TEH3 1009 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 ATOH8Q96SQ7 321 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 TWSG1Q9GZX9 223 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 STMN4Q9H169 189 aaPredicted RBP16.12■□□□□ 0.17
SUMO1-208ENST00000409627 LRRN3Q9H3W5 708 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 ZNF358Q9NW07 568 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 MKS1Q9NXB0 559 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 OR6C2Q9NZP2 312 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 OGFRQ9NZT2 677 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 CIDEBQ9UHD4 219 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 DCDC2Q9UHG0 476 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 LNPEPQ9UIQ6 1025 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 RNF112Q9ULX5 631 aa16.12■□□□□ 0.17
SUMO1-208ENST00000409627 PTPRZ1P23471 2315 aaPredicted RBP16.12■□□□□ 0.17
SUMO1-208ENST00000409627 A0A1W2PQM1 296 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 KRT87PA6NCN2 255 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 OR5K3A6NET4 321 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 ZNF839A8K0R7 811 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 NTN3O00634 580 aaPredicted RBP16.11■□□□□ 0.17
SUMO1-208ENST00000409627 DKK1O94907 266 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 SLC16A8O95907 504 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 RPLP0P05388 317 aaKnown RBP16.11■□□□□ 0.17
SUMO1-208ENST00000409627 AMD1P17707 334 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 CD1CP29017 333 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 CCL7P80098 99 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 E2F1Q01094 437 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 TGFBIQ15582 683 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 CDKL4Q5MAI5 379 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 ANKS6Q68DC2 871 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 GPSM1Q86YR5 675 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 C4orf33Q8N1A6 199 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 RSC1A1Q92681 617 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 ALKBH8Q96BT7 664 aaKnown RBP16.11■□□□□ 0.17
SUMO1-208ENST00000409627 AHCYL2Q96HN2 611 aaKnown RBP16.11■□□□□ 0.17
SUMO1-208ENST00000409627 IL17FQ96PD4 163 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 RAB33BQ9H082 229 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 CENPHQ9H3R5 247 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 XKR8Q9H6D3 395 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 TMBIM4Q9HC24 238 aa16.11■□□□□ 0.17
SUMO1-208ENST00000409627 ARL15Q9NXU5 204 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms