RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 FGF11Q92914 225 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 B3GNT4Q9C0J1 378 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 TWSG1Q9GZX9 223 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 TXNDC16Q9P2K2 825 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 CELSR3Q9NYQ7 3312 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 USP24Q9UPU5 2620 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 PIPSLA2A3N6 862 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 CHRM5P08912 532 aaPredicted RBP19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 MPC1LP0DKB6 136 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 NELFEP18615 380 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 PRDX3P30048 256 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 RGS4P49798 205 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 SEPHS1P49903 392 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 MAPK10P53779 464 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 KBTBD12Q3ZCT8 623 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 PAQR3Q6TCH7 311 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 CYHR1Q6ZMK1 362 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 KMT5CQ86Y97 462 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 SPNS2Q8IVW8 549 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 FBF1Q8TES7 1133 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 SLC41A2Q96JW4 573 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 TAAR9Q96RI9 348 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 RAB11FIP5Q9BXF6 653 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 CIDEBQ9UHD4 219 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 SLC39A10Q9ULF5 831 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 ARHGEF33A8MVX0 844 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 GFYI3L273 518 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 TAF4O00268 1085 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 CATP04040 527 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 BDKRB1P46663 353 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 MC2RQ01718 297 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 PDAP1Q13442 181 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 TMEM164Q5U3C3 297 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 PIWIL4Q7Z3Z4 852 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 CTAGE3PQ8IX95 158 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 SNIP1Q8TAD8 396 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 EEF1AKMT1Q8WVE0 214 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 USP7Q93009 1102 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 VPS39Q96JC1 886 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 ELMO2Q96JJ3 720 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 OLFM1Q99784 485 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 PITPNM3Q9BZ71 974 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 FBXO8Q9NRD0 319 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 C1GALT1Q9NS00 363 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 SIDT1Q9NXL6 827 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 SLC39A1Q9NY26 324 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 ACTR10Q9NZ32 417 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 NINJ2Q9NZG7 142 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 NFU1Q9UMS0 254 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 PCDHGA3Q9Y5H0 932 aa19.22■□□□□ 0.67
PDLIM2-207ENST00000409417 FAM95CA0A1B0GW59 222 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 RASGRF2O14827 1237 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 ZBTB11O95625 1053 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 SLC5A2P31639 672 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 GP5P40197 560 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 RAB15P59190 212 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 IL2P60568 153 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 HSD11B2P80365 405 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 NAB1Q13506 487 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 KIR2DS3Q14952 304 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 CCSMST1Q4G0I0 132 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 SPESP1Q6UW49 350 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 RASGRP3Q8IV61 690 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 RAB42Q8N4Z0 105 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 LINC01555Q8NAE3 123 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 FBXO15Q8NCQ5 510 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 OR2L8Q8NGY9 312 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 PPM1MQ96MI6 270 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 DDA1Q9BW61 102 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 ASPSCR1Q9BZE9 553 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 SPHK1Q9NYA1 384 aa19.21■□□□□ 0.67
PDLIM2-207ENST00000409417 ZZEF1O43149 2961 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 C9orf172C9J069 976 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 MYO1CO00159 1063 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 TSPAN12O95859 305 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 UGT2B7P16662 529 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 CDH3P22223 829 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 PHBP35232 272 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 PPM1NQ8N819 430 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 OR9A1PQ8NGU1 263 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 HMGCLL1Q8TB92 370 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 IL17FQ96PD4 163 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 OR2A14Q96R47 310 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 RBBP8Q99708 897 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 LNPEPQ9UIQ6 1025 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 ACSL6Q9UKU0 697 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 RAXQ9Y2V3 346 aa19.2■□□□□ 0.66
PDLIM2-207ENST00000409417 TLX3O43711 291 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 ZBTB14O43829 449 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 PRAMEF10O60809 474 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 SAT1P21673 171 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 MAP4P27816 1152 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 ARL4DP49703 201 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 PGGT1BP53609 377 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 PCBP4P57723 403 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 TAS2R39P59534 338 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 SH3BP2P78314 561 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 POU4F1Q01851 419 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 SLMAPQ14BN4 828 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms