RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 PCDH1Q08174 1060 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 CNTN1Q12860 1018 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 CAMK2GQ13555 558 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 RCAN2Q14206 197 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 IMPG1Q17R60 797 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 MAP7D1Q3KQU3 841 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 ZNF648Q5T619 568 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 CACHD1Q5VU97 1274 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 IL23RQ5VWK5 629 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 LIPJQ5W064 366 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 RAET1GQ6H3X3 334 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 SDE2Q6IQ49 451 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 C8orf82Q6P1X6 216 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 ADAMTSL4Q6UY14 1074 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 LRRC74BQ6ZQY2 392 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 PRR23BQ6ZRT6 265 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 SFTPA1Q8IWL2 248 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 SLC22A15Q8IZD6 547 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 BEND7Q8N7W2 519 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 DCBLD1Q8N8Z6 715 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 SNX31Q8N9S9 440 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 GLB1L3Q8NCI6 653 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 ST13P5Q8NFI4 369 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 CSGALNACT1Q8TDX6 532 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 FGF14Q92915 247 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 USP7Q93009 1102 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 ASB9Q96DX5 294 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 RSRC1Q96IZ7 334 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 HIC2Q96JB3 615 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 NECTIN4Q96NY8 510 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 ZBTB18Q99592 522 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 KXD1Q9BQD3 176 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 GPATCH1Q9BRR8 931 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 TACO1Q9BSH4 297 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 PRR14Q9BWN1 585 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 RSPH9Q9H1X1 276 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 OR2AG1Q9H205 316 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 VCX3BQ9H321 246 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 SLC52A3Q9NQ40 469 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 CLEC1BQ9P126 229 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 MAP10Q9P2G4 905 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 SUCOQ9UBS9 1254 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 KLQ9UEF7 1012 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 GIMAP2Q9UG22 337 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 CD300AQ9UGN4 299 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 ZNHIT2Q9UHR6 403 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 LEF1Q9UJU2 399 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 HCN2Q9UL51 889 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 ZNF490Q9ULM2 529 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 CCL27Q9Y4X3 112 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 KLHL33A6NCF5 533 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 MGAT4DA6NG13 374 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 ARHGEF33A8MVX0 844 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 GPR89AB7ZAQ6 455 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 NPIPB8E9PQR5 432 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 ARNTLO00327 626 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 ACOT8O14734 319 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 SEC22BO75396 215 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 EEDO75530 441 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 POP7O75817 140 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 SORBS2O94875 1100 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 SOD1P00441 154 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 GPR89BP0CG08 455 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 XRCC1P18887 633 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 CAPN3P20807 821 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 BMP8BP34820 402 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 DPP6P42658 865 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 HTR6P50406 440 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 NME5P56597 212 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 SESN3P58005 492 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 UFM1P61960 85 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 MS4A2Q01362 244 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 RPA4Q13156 261 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 AGERQ15109 404 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 TAF11Q15544 211 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 CST6Q15828 149 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 CPSF6Q16630 551 aaKnown RBP eCLIP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 MUM1Q2TAK8 710 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 RFTN2Q52LD8 501 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 CMPK2Q5EBM0 449 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 PIP5KL1Q5T9C9 394 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 EGFLAMQ63HQ2 1017 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 NAIF1Q69YI7 327 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 PNCKQ6P2M8 343 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 CYP20A1Q6UW02 462 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 LAYNQ6UX15 382 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 MBOAT1Q6ZNC8 495 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 TRAPPC5Q8IUR0 188 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 TMEM126BQ8IUX1 230 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 KLHDC8AQ8IYD2 350 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 CFAP206Q8IYR0 622 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 Q8N3U1 123 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 ZNF513Q8N8E2 541 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 PROKR1Q8TCW9 393 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 SELENOMQ8WWX9 145 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 PYDC1Q8WXC3 89 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 DNAJC9Q8WXX5 260 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 LRRC58Q96CX6 371 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 CHFRQ96EP1 664 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms