RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 RASSF9O75901 435 aa19.67■□□□□ 0.74
PTCD3-202ENST00000409326 ABHD2P08910 425 aa19.67■□□□□ 0.74
PTCD3-202ENST00000409326 CSTF2P33240 577 aaKnown RBP eCLIP19.67■□□□□ 0.74
PTCD3-202ENST00000409326 KPNA2P52292 529 aaKnown RBP19.67■□□□□ 0.74
PTCD3-202ENST00000409326 PMS2P54278 862 aa19.67■□□□□ 0.74
PTCD3-202ENST00000409326 CCSMST1Q4G0I0 132 aa19.67■□□□□ 0.74
PTCD3-202ENST00000409326 CACHD1Q5VU97 1274 aa19.67■□□□□ 0.74
PTCD3-202ENST00000409326 CEP97Q8IW35 865 aa19.67■□□□□ 0.74
PTCD3-202ENST00000409326 MYO1HQ8N1T3 1032 aa19.67■□□□□ 0.74
PTCD3-202ENST00000409326 PRR11Q96HE9 360 aaPredicted RBP19.67■□□□□ 0.74
PTCD3-202ENST00000409326 ZNF768Q9H5H4 540 aaKnown RBP19.67■□□□□ 0.74
PTCD3-202ENST00000409326 SPATA7Q9P0W8 599 aa19.67■□□□□ 0.74
PTCD3-202ENST00000409326 SEMA5BQ9P283 1151 aa19.67■□□□□ 0.74
PTCD3-202ENST00000409326 CIDEBQ9UHD4 219 aa19.67■□□□□ 0.74
PTCD3-202ENST00000409326 SLC39A10Q9ULF5 831 aa19.67■□□□□ 0.74
PTCD3-202ENST00000409326 A0A087WUV0 522 aaPredicted RBP19.66■□□□□ 0.74
PTCD3-202ENST00000409326 PIPSLA2A3N6 862 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 PMS2P1A4D2B8 440 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 C2orf74A8MZ97 194 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 MYO1CO00159 1063 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 KIF1CO43896 1103 aaKnown RBP19.66■□□□□ 0.74
PTCD3-202ENST00000409326 ITGA2BP08514 1039 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 CHRM5P08912 532 aaPredicted RBP19.66■□□□□ 0.74
PTCD3-202ENST00000409326 SLC12A2P55011 1212 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 SP140Q13342 867 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 ZNF460Q14592 562 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 USP10Q14694 798 aaKnown RBP19.66■□□□□ 0.74
PTCD3-202ENST00000409326 IGF2-ASQ6U949 168 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 TMEM207Q6UWW9 146 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 UNQ6494/PRO21346Q6UXR6 183 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 CARFQ8N187 725 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 RAB42Q8N4Z0 105 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 LINC01555Q8NAE3 123 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 OR9A1PQ8NGU1 263 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 OR2L8Q8NGY9 312 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 UBXN4Q92575 508 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 TSPAN17Q96FV3 270 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 PDLIM5Q96HC4 596 aaKnown RBP19.66■□□□□ 0.74
PTCD3-202ENST00000409326 IL17FQ96PD4 163 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 MAP3K3Q99759 626 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 CAB39LQ9H9S4 337 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 SYTL2Q9HCH5 934 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 ACTR10Q9NZ32 417 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 AK5Q9Y6K8 562 aa19.66■□□□□ 0.74
PTCD3-202ENST00000409326 KRT87PA6NCN2 255 aa19.65■□□□□ 0.74
PTCD3-202ENST00000409326 AGRPO00253 132 aa19.65■□□□□ 0.74
PTCD3-202ENST00000409326 RIPK2O43353 540 aa19.65■□□□□ 0.74
PTCD3-202ENST00000409326 ZBTB14O43829 449 aa19.65■□□□□ 0.74
PTCD3-202ENST00000409326 DXOO77932 396 aaKnown RBP19.65■□□□□ 0.74
PTCD3-202ENST00000409326 WISP3O95389 354 aaPredicted RBP19.65■□□□□ 0.74
PTCD3-202ENST00000409326 C8GP07360 202 aa19.65■□□□□ 0.74
PTCD3-202ENST00000409326 JMJD7P0C870 316 aa19.65■□□□□ 0.74
PTCD3-202ENST00000409326 HGFP14210 728 aa19.65■□□□□ 0.74
PTCD3-202ENST00000409326 MAP4P27816 1152 aaKnown RBP19.65■□□□□ 0.74
PTCD3-202ENST00000409326 PRDX3P30048 256 aaKnown RBP19.65■□□□□ 0.74
PTCD3-202ENST00000409326 ZKSCAN8Q15776 578 aaPredicted RBP19.65■□□□□ 0.74
PTCD3-202ENST00000409326 FOXR1Q6PIV2 292 aa19.65■□□□□ 0.74
PTCD3-202ENST00000409326 UBE2R2Q712K3 238 aaPredicted RBP19.65■□□□□ 0.74
PTCD3-202ENST00000409326 LSMEM2Q8N112 164 aa19.65■□□□□ 0.74
PTCD3-202ENST00000409326 NKAPQ8N5F7 415 aaKnown RBP19.65■□□□□ 0.74
PTCD3-202ENST00000409326 DENND1AQ8TEH3 1009 aa19.65■□□□□ 0.74
PTCD3-202ENST00000409326 KLHL6Q8WZ60 621 aa19.65■□□□□ 0.74
PTCD3-202ENST00000409326 GPAMQ9HCL2 828 aa19.65■□□□□ 0.74
PTCD3-202ENST00000409326 IGHV5-51A0A0C4DH38 117 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 C1QTNF9BB2RNN3 333 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 SLC16A5O15375 505 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 BRINP1O60477 761 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 C1QTNF9P0C862 333 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 ERGP11308 486 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 STMN1P16949 149 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 ITIH1P19827 911 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 PEBP1P30086 187 aaKnown RBP19.64■□□□□ 0.73
PTCD3-202ENST00000409326 MLLT3P42568 568 aaPredicted RBP19.64■□□□□ 0.73
PTCD3-202ENST00000409326 VSNL1P62760 191 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 KIR2DS3Q14952 304 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 UAP1Q16222 522 aaPredicted RBP19.64■□□□□ 0.73
PTCD3-202ENST00000409326 ANKS6Q68DC2 871 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 SPESP1Q6UW49 350 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 KMT5CQ86Y97 462 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 UHMK1Q8TAS1 419 aaKnown RBP19.64■□□□□ 0.73
PTCD3-202ENST00000409326 HMGCLL1Q8TB92 370 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 SLC44A1Q8WWI5 657 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 DLG3Q92796 817 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 MRRFQ96E11 262 aaKnown RBP19.64■□□□□ 0.73
PTCD3-202ENST00000409326 PKP4Q99569 1192 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 SLC12A9Q9BXP2 914 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 PITPNM3Q9BZ71 974 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 C1GALT1Q9NS00 363 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 SPHK1Q9NYA1 384 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 DKK4Q9UBT3 224 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 PISDQ9UG56 409 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.64■□□□□ 0.73
PTCD3-202ENST00000409326 LNPEPQ9UIQ6 1025 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 ADAMTS6Q9UKP5 1117 aa19.64■□□□□ 0.73
PTCD3-202ENST00000409326 V9GYY5 206 aaPredicted RBP19.64■□□□□ 0.73
PTCD3-202ENST00000409326 EFCAB7A8K855 629 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 INHBAP08476 426 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 FGF3P11487 239 aaPredicted RBP19.63■□□□□ 0.73
PTCD3-202ENST00000409326 CCL4P13236 92 aa19.63■□□□□ 0.73
PTCD3-202ENST00000409326 UGT2B7P16662 529 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms