RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 PGLYRP2Q96PD5 576 aa17.33■□□□□ 0.37
SMPD4-202ENST00000409031 SYT11Q9BT88 431 aa17.33■□□□□ 0.37
SMPD4-202ENST00000409031 EMC3Q9P0I2 261 aa17.33■□□□□ 0.37
SMPD4-202ENST00000409031 TRPS1Q9UHF7 1281 aa17.33■□□□□ 0.37
SMPD4-202ENST00000409031 PTGER3P43115 390 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 ZNF678Q5SXM1 525 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 PAQR3Q6TCH7 311 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 DCP2Q8IU60 420 aaKnown RBP17.33■□□□□ 0.36
SMPD4-202ENST00000409031 GJD3Q8N144 294 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 NCSTNQ92542 709 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 C1QTNF1Q9BXJ1 281 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 STOX2Q9P2F5 926 aaPredicted RBP17.33■□□□□ 0.36
SMPD4-202ENST00000409031 A8MX80 341 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 L7N2F9 121 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 PRPS1L1P21108 318 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 CHRNA4P43681 627 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 RPIAP49247 311 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 EMX2Q04743 252 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 SMYD5Q6GMV2 418 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 FAM151BQ6UXP7 276 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 TOMM5Q8N4H5 51 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 OR8J3Q8NGG0 315 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 PARK7Q99497 189 aaKnown RBP17.33■□□□□ 0.36
SMPD4-202ENST00000409031 ZNF282Q9UDV7 671 aaPredicted RBP17.33■□□□□ 0.36
SMPD4-202ENST00000409031 RABL2BQ9UNT1 228 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 RUVBL1Q9Y265 456 aaKnown RBP17.33■□□□□ 0.36
SMPD4-202ENST00000409031 PCDHGA4Q9Y5G9 962 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 MON2Q7Z3U7 1717 aa17.33■□□□□ 0.36
SMPD4-202ENST00000409031 AQP9O43315 295 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 F7P08709 466 aaPredicted RBP17.32■□□□□ 0.36
SMPD4-202ENST00000409031 PTPRAP18433 802 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 MAP2K3P46734 347 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 PAFAH1B3Q15102 231 aaKnown RBP17.32■□□□□ 0.36
SMPD4-202ENST00000409031 SLC39A4Q6P5W5 647 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 ZNF730Q6ZMV8 503 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 ZNF367Q7RTV3 350 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 KIF18BQ86Y91 864 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 C2orf69Q8N8R5 385 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 LSM14AQ8ND56 463 aaKnown RBP17.32■□□□□ 0.36
SMPD4-202ENST00000409031 ZC3H10Q96K80 434 aaKnown RBP17.32■□□□□ 0.36
SMPD4-202ENST00000409031 ART5Q96L15 291 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 CEP295NLQ96MC4 621 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 IL4I1Q96RQ9 567 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 SGK2Q9HBY8 427 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 GALPQ9UBC7 116 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 PCDHGA7Q9Y5G6 932 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 E9PAM4 449 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 IFNGP01579 166 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 CXCR3P49682 368 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 ZNF81P51508 661 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 NCS1P62166 190 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 CACNG1Q06432 222 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 FAM182AQ5T1J6 154 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 UBE2UQ5VVX9 321 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 CRYBG2Q8N1P7 616 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 ZBTB2Q8N680 514 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 OXCT2Q9BYC2 517 aaPredicted RBP17.32■□□□□ 0.36
SMPD4-202ENST00000409031 UBQLN2Q9UHD9 624 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 HCN2Q9UL51 889 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 TBC1D24Q9ULP9 559 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 M0R233 179 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 ECI2O75521 394 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 FGBP02675 491 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 PEBP4Q96S96 227 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 ENPP5Q9UJA9 477 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 PRKAB1Q9Y478 270 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 FAM25EA8MYX2 175 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 NT5C1B-RDH14C9J2C7 533 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 DCKP27707 260 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 RPA4Q13156 261 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 MAPK15Q8TD08 544 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 HAVCR1Q96D42 359 aa17.32■□□□□ 0.36
SMPD4-202ENST00000409031 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.31■□□□□ 0.36
SMPD4-202ENST00000409031 C9IYK1 514 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 TLR4O00206 839 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 RPL9P32969 192 aaKnown RBP17.31■□□□□ 0.36
SMPD4-202ENST00000409031 DAOAP59103 153 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 HYLS1Q96M11 299 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 BEX2Q9BXY8 128 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 ATP13A3Q9H7F0 1226 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 KANSL3Q9P2N6 904 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 MAP4K5Q9Y4K4 846 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 HLA-DPB1P04440 258 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 F8A1P23610 371 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 GCAP28676 217 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 CLK3P49761 638 aaKnown RBP17.31■□□□□ 0.36
SMPD4-202ENST00000409031 RPL6Q02878 288 aaKnown RBP17.31■□□□□ 0.36
SMPD4-202ENST00000409031 SOWAHAQ2M3V2 549 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 GPN2Q9H9Y4 310 aaPredicted RBP17.31■□□□□ 0.36
SMPD4-202ENST00000409031 RAD18Q9NS91 495 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 AFDNP55196 1824 aaKnown RBP17.31■□□□□ 0.36
SMPD4-202ENST00000409031 AKAP8O43823 692 aaKnown RBP17.31■□□□□ 0.36
SMPD4-202ENST00000409031 ITPKAP23677 461 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 NIPAL4Q0D2K0 466 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 HEPACAMQ14CZ8 416 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 TMEM203Q969S6 136 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 GJD4Q96KN9 370 aaPredicted RBP17.31■□□□□ 0.36
SMPD4-202ENST00000409031 BTN2A3PQ96KV6 586 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 WACQ9BTA9 647 aa17.31■□□□□ 0.36
SMPD4-202ENST00000409031 YIPF2Q9BWQ6 316 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms