RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 DOK6Q6PKX4 331 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 SZRD1Q7Z422 152 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 PACRGLQ8N7B6 248 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 HM13Q8TCT9 377 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 TSPEARQ8WU66 669 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 HTATIP2Q9BUP3 242 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 BLOC1S6Q9UL45 172 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 OARD1Q9Y530 152 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 hCG_2039718K7EN88 272 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 AP1G1O43747 822 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 FKTNO75072 461 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 PDYNP01213 254 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 BCKDHAP12694 445 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 HTR1EP28566 365 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 PSMD8P48556 350 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 PIGFQ07326 219 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 NAE1Q13564 534 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 ATP6AP1Q15904 470 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 XKR7Q5GH72 579 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 INTS11Q5TA45 600 aaKnown RBP11.63□□□□□ -0.55
PCNX4-204ENST00000406949 ALG1LQ6GMV1 187 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 ANKRD26P1Q6NSI1 321 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 UTS2BQ765I0 119 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 ADHFE1Q8IWW8 467 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 ZDHHC3Q9NYG2 299 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 ATXN10Q9UBB4 475 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 VPS4AQ9UN37 437 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 MYLKQ15746 1914 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 MAPK1P28482 360 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 LSM3P62310 102 aaKnown RBP11.63□□□□□ -0.55
PCNX4-204ENST00000406949 DGCR6Q14129 220 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 PCBP2Q15366 365 aaKnown RBP eCLIP11.63□□□□□ -0.553e-13■□□□□ 8.7
PCNX4-204ENST00000406949 GPR33Q49SQ1 333 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 COQ5Q5HYK3 327 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 CRTC1Q6UUV9 634 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 SERPINA13PQ6UXR4 307 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 TPRG1Q6ZUI0 275 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 C12orf43Q96C57 262 aaKnown RBP11.63□□□□□ -0.55
PCNX4-204ENST00000406949 RHBDF1Q96CC6 855 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 FOPNLQ96NB1 174 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 BRINP2Q9C0B6 783 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 MTG2Q9H4K7 406 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 OCEL1Q9H607 264 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 SPASTQ9UBP0 616 aa11.63□□□□□ -0.55
PCNX4-204ENST00000406949 MGAT4DA6NG13 374 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 PITPNM1O00562 1244 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 TULP3O75386 442 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 CD160O95971 181 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 F11P03951 625 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 HNRNPCP07910 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
PCNX4-204ENST00000406949 CA5AP35218 305 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 KIR3DL1P43629 444 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 RAD23AP54725 363 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 DEFB103AP81534 67 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 HTRA3P83110 453 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 GPRC6AQ5T6X5 926 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 C22orf39Q6P5X5 142 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 Q6ZVL8 140 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 CYP2U1Q7Z449 544 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 PATL1Q86TB9 770 aaKnown RBP11.62□□□□□ -0.55
PCNX4-204ENST00000406949 FAM86B1Q8N7N1 296 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 CHST14Q8NCH0 376 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 ZNF296Q8WUU4 475 aaPredicted RBP11.62□□□□□ -0.55
PCNX4-204ENST00000406949 ITCHQ96J02 903 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 TOR3AQ9H497 397 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 SLC32A1Q9H598 525 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 CEPT1Q9Y6K0 416 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 C5orf42Q9H799 3197 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 A0A1W2PPW3 197 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 H0YJX3 145 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 B3GALT4O96024 378 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 FTH1P02794 183 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 IL6P05231 212 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 HRH2P25021 359 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 STT3AP46977 705 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 SF1Q15637 639 aaKnown RBP11.62□□□□□ -0.55
PCNX4-204ENST00000406949 PLPP4Q5VZY2 271 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 TTC23Q5W5X9 447 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 C2orf73Q8N5S3 287 aaPredicted RBP11.62□□□□□ -0.55
PCNX4-204ENST00000406949 ING5Q8WYH8 240 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 EGLN2Q96KS0 407 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 WRAP53Q9BUR4 548 aaKnown RBP11.62□□□□□ -0.55
PCNX4-204ENST00000406949 VN1R3Q9BXE9 311 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 HPS4Q9NQG7 708 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 DNAJC11Q9NVH1 559 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 LMCD1Q9NZU5 365 aa11.62□□□□□ -0.55
PCNX4-204ENST00000406949 LEFTY2O00292 366 aa11.61□□□□□ -0.55
PCNX4-204ENST00000406949 TAPBPO15533 448 aa11.61□□□□□ -0.55
PCNX4-204ENST00000406949 EPN2O95208 641 aa11.61□□□□□ -0.55
PCNX4-204ENST00000406949 POLR2LP62875 67 aaKnown RBP11.61□□□□□ -0.55
PCNX4-204ENST00000406949 GRIK2Q13002 908 aa11.61□□□□□ -0.55
PCNX4-204ENST00000406949 LDLRAP1Q5SW96 308 aa11.61□□□□□ -0.55
PCNX4-204ENST00000406949 BROXQ5VW32 411 aa11.61□□□□□ -0.55
PCNX4-204ENST00000406949 TBPL2Q6SJ96 375 aa11.61□□□□□ -0.55
PCNX4-204ENST00000406949 THAP5Q7Z6K1 395 aa11.61□□□□□ -0.55
PCNX4-204ENST00000406949 TRAPPC5Q8IUR0 188 aa11.61□□□□□ -0.55
PCNX4-204ENST00000406949 MICU2Q8IYU8 434 aa11.61□□□□□ -0.55
PCNX4-204ENST00000406949 P2RY12Q9H244 342 aa11.61□□□□□ -0.55
PCNX4-204ENST00000406949 FAM83DQ9H4H8 585 aa11.61□□□□□ -0.55
PCNX4-204ENST00000406949 CWH43Q9H720 699 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms