RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 B4DGG1 531 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 LMO7DNF2Z398 122 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 YY2O15391 372 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 SHOX2O60902 331 aaPredicted RBP19.89■□□□□ 0.77
CHKB-201ENST00000406938 SUPT7LO94864 414 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 SLC2A4P14672 509 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 ARRB2P32121 409 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 SLC19A1P41440 591 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 CCR10P46092 362 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 RXRGP48443 463 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 PCBP2Q15366 365 aaKnown RBP eCLIP19.89■□□□□ 0.776e-9■■□□□ 11.9
CHKB-201ENST00000406938 SHBQ15464 509 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 TUBB8Q3ZCM7 444 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 SLC23A3Q6PIS1 610 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 FRMD7Q6ZUT3 714 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 ZDHHC1Q8WTX9 485 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 ATL1Q8WXF7 558 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 NSUN5Q96P11 429 aaKnown RBP19.89■□□□□ 0.77
CHKB-201ENST00000406938 ATG10Q9H0Y0 220 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 GSTO2Q9H4Y5 243 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 SLCO1B3Q9NPD5 702 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 POLG2Q9UHN1 485 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 PCTPQ9UKL6 214 aa19.89■□□□□ 0.77
CHKB-201ENST00000406938 KIR2DS5A0A0G2JLQ3 304 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 A0A0G2JNG1 304 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 TMEM114B3SHH9 223 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 KIR2DS3K7RE56 304 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 E2F3O00716 465 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 ITM2AO43736 263 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 SNNO75324 88 aaPredicted RBP19.88■□□□□ 0.77
CHKB-201ENST00000406938 LYPLA1O75608 230 aaPredicted RBP19.88■□□□□ 0.77
CHKB-201ENST00000406938 GGT5P36269 586 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 GDF5P43026 501 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 RCN2Q14257 317 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 KIR2DS5Q14953 304 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 CCDC6Q16204 474 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 ZNF423Q2M1K9 1284 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 DEFB133Q30KQ1 61 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 HLA-BQ31612 363 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 AGTRAPQ6RW13 159 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 FAM47EQ6ZV65 393 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 SDR16C5Q8N3Y7 309 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 SFRP1Q8N474 314 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 SLC37A2Q8TED4 501 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 ZNF480Q8WV37 535 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 CAMK1GQ96NX5 476 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 IL17FQ96PD4 163 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 CD244Q9BZW8 370 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 C20orf27Q9GZN8 174 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 ARRDC1-AS1Q9H2J1 176 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 ZNF395Q9H8N7 513 aaPredicted RBP19.88■□□□□ 0.77
CHKB-201ENST00000406938 SLC6A14Q9UN76 642 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 PCDHGA5Q9Y5G8 931 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 COLEC10Q9Y6Z7 277 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 DMDP11532 3685 aa19.88■□□□□ 0.77
CHKB-201ENST00000406938 OR5K4A6NMS3 321 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 NPHS1O60500 1241 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 CCNT2O60583 730 aaKnown RBP19.87■□□□□ 0.77
CHKB-201ENST00000406938 ANXA6P08133 673 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 NDUFS1P28331 727 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 EPHA8P29322 1005 aaPredicted RBP19.87■□□□□ 0.77
CHKB-201ENST00000406938 SLC6A12P48065 614 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 SLC1A6P48664 564 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 ABCE1P61221 599 aaKnown RBP19.87■□□□□ 0.77
CHKB-201ENST00000406938 CBX1P83916 185 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 BNIP3Q12983 259 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 PTCHD3Q3KNS1 767 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 ANKS6Q68DC2 871 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 ATG14Q6ZNE5 492 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 TRIM48Q8IWZ4 208 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 SYTL1Q8IYJ3 562 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 PPFIBP2Q8ND30 876 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 PRSS33Q8NF86 280 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 OR52E1Q8NGJ3 308 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 PPP4R1Q8TF05 950 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 ZNF483Q8TF39 744 aaPredicted RBP19.87■□□□□ 0.77
CHKB-201ENST00000406938 TMEM131Q92545 1883 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 PYCR2Q96C36 320 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 ZNF317Q96PQ6 595 aaPredicted RBP19.87■□□□□ 0.77
CHKB-201ENST00000406938 NRTNQ99748 197 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 MENTQ9BUN1 341 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 PITPNM3Q9BZ71 974 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 DRC3Q9H069 523 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 SMOC1Q9H4F8 434 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 POT1Q9NUX5 634 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 OPTCQ9UBM4 332 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 ANKRD12Q6UB98 2062 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 MYO15AQ9UKN7 3530 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 TDRD6O60522 2096 aaKnown RBP19.87■□□□□ 0.77
CHKB-201ENST00000406938 A0A1B0GTQ1 180 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 STK16O75716 305 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 CHRNGP07510 517 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 VIMP08670 466 aaKnown RBP19.87■□□□□ 0.77
CHKB-201ENST00000406938 ERGP11308 486 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 XRCC1P18887 633 aaPredicted RBP19.87■□□□□ 0.77
CHKB-201ENST00000406938 PNLIPRP1P54315 467 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 CDH13P55290 713 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 UBE2IP63279 158 aaKnown RBP19.87■□□□□ 0.77
CHKB-201ENST00000406938 OCRLQ01968 901 aa19.87■□□□□ 0.77
CHKB-201ENST00000406938 TCF15Q12870 199 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms