RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 COQ4Q9Y3A0 265 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 SNX10Q9Y5X0 201 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 H7C4K7 107 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 SMAD9O15198 467 aaKnown RBP9.61□□□□□ -0.87
HERC3-202ENST00000402738 HCN1O60741 890 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 DNAJB5O75953 348 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 PRPS2P11908 318 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 CHRNA4P43681 627 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 CPT1AP50416 773 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 GK3PQ14409 553 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 TOR1AIP1Q5JTV8 583 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 SMARCD3Q6STE5 483 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 FRRS1Q6ZNA5 592 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 CAND1Q86VP6 1230 aaKnown RBP9.61□□□□□ -0.87
HERC3-202ENST00000402738 COLGALT2Q8IYK4 626 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 CADM2Q8N3J6 435 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 INO80EQ8NBZ0 244 aaPredicted RBP9.61□□□□□ -0.87
HERC3-202ENST00000402738 CLP1Q92989 425 aaKnown RBP9.61□□□□□ -0.87
HERC3-202ENST00000402738 MAELQ96JY0 434 aaKnown RBP9.61□□□□□ -0.87
HERC3-202ENST00000402738 ATG10Q9H0Y0 220 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 SLA2Q9H6Q3 261 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 EQTNQ9NQ60 294 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 THUMPD1Q9NXG2 353 aaKnown RBP9.61□□□□□ -0.87
HERC3-202ENST00000402738 TAS2R3Q9NYW6 316 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 DISP2A7MBM2 1401 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 PITPNM1O00562 1244 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 BCAS1O75363 584 aaPredicted RBP9.61□□□□□ -0.87
HERC3-202ENST00000402738 CREG1O75629 220 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 HIST1H2ABP04908 130 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 ANXA3P12429 323 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 DNASE1P24855 282 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 GSTM2P28161 218 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 XKP51811 444 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 AP1S2P56377 157 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 HMGCS1Q01581 520 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 OGDHQ02218 1023 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 CLCA4Q14CN2 919 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 HEPACAMQ14CZ8 416 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 PRAMEF17Q5VTA0 474 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 LRRC66Q68CR7 880 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 ANKRD26P1Q6NSI1 321 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 DCLRE1AQ6PJP8 1040 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 HIST3H2AQ7L7L0 130 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 ZNF438Q7Z4V0 828 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 ZC3HC1Q86WB0 502 aaKnown RBP9.61□□□□□ -0.87
HERC3-202ENST00000402738 SYNPOQ8N3V7 929 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 OR13J1Q8NGT2 312 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 HIST1H2ACQ93077 130 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 PYURFQ96I23 114 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 CCDC3Q9BQI4 270 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 OXCT2Q9BYC2 517 aaPredicted RBP9.61□□□□□ -0.87
HERC3-202ENST00000402738 NFKBIZQ9BYH8 718 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 ZDHHC6Q9H6R6 413 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 NECTIN3Q9NQS3 549 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 ZDHHC7Q9NXF8 308 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 POFUT2Q9Y2G5 429 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 DISC1C4P0D8 188 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 WWP2O00308 870 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 KPNA3O00505 521 aaPredicted RBP9.61□□□□□ -0.87
HERC3-202ENST00000402738 CD40LGP29965 261 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 CDH5P33151 784 aaPredicted RBP9.61□□□□□ -0.87
HERC3-202ENST00000402738 ARFIP1P53367 373 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 OLIG2Q13516 323 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 NAE1Q13564 534 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 PIGGQ5H8A4 983 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 KIAA0930Q6ICG6 404 aaPredicted RBP9.61□□□□□ -0.87
HERC3-202ENST00000402738 FAM171BQ6P995 826 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 LRRN1Q6UXK5 716 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 NUDT18Q6ZVK8 323 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 ZNF767PQ75MW2 155 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 OR6C4Q8NGE1 309 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 TSNAXQ99598 290 aaKnown RBP9.61□□□□□ -0.87
HERC3-202ENST00000402738 ZIM2Q9NZV7 527 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 HACL1Q9UJ83 578 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 CPQQ9Y646 472 aa9.61□□□□□ -0.87
HERC3-202ENST00000402738 C5orf51A6NDU8 294 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 BTBD19C9JJ37 291 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 FGBP02675 491 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 CXCR3P49682 368 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 PSMA6P60900 246 aaKnown RBP9.6□□□□□ -0.87
HERC3-202ENST00000402738 BTN3A2P78410 334 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 FBXL19Q6PCT2 694 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 PM20D2Q8IYS1 436 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 CHST4Q8NCG5 386 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 SLC29A1Q99808 456 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 MGME1Q9BQP7 344 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 FTHL17Q9BXU8 183 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 OR51V1Q9H2C8 321 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 ST6GALNAC4Q9H4F1 302 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 RANBP3Q9H6Z4 567 aaPredicted RBP9.6□□□□□ -0.87
HERC3-202ENST00000402738 NUDT15Q9NV35 164 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 SLC35F4A4IF30 521 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 NUPL2O15504 423 aaKnown RBP9.6□□□□□ -0.87
HERC3-202ENST00000402738 B4GALT4O60513 344 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 RP2O75695 350 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 ATE1O95260 518 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 APOC1P02654 83 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 LHCGRP22888 699 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 L1CAMP32004 1257 aa9.6□□□□□ -0.87
HERC3-202ENST00000402738 PLA2G16P53816 162 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms