RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 HNMTP50135 292 aa16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 NEK2P51955 445 aa16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 SLC36A3Q495N2 470 aa16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 PYCR3Q53H96 274 aa16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 NEK5Q6P3R8 708 aa16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 Q6ZVL8 140 aa16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 NAT16Q8N8M0 369 aa16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 MRPL43Q8N983 215 aaKnown RBP16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 CYB5D2Q8WUJ1 264 aa16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 OSCP1Q8WVF1 389 aa16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 SORCS1Q8WY21 1168 aa16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 HAUS8Q9BT25 410 aa16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 THUMPD3Q9BV44 507 aaKnown RBP16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 IKZF5Q9H5V7 419 aa16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 SLC25A37Q9NYZ2 338 aa16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 CROCCQ5TZA2 2017 aa16.54■□□□□ 0.24
DNMT3A-205ENST00000402667 LEFTY1O75610 366 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 MYF6P23409 242 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 GGTA1PQ4G0N0 100 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 ARHGAP15Q53QZ3 475 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 ARSIQ5FYB1 569 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 MSRB3Q8IXL7 192 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 OR2T12Q8NG77 320 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 OR10A6Q8NH74 314 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 ITFG1Q8TB96 612 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 FRS2Q8WU20 508 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 OR52E6Q96RD3 313 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 ELOVL6Q9H5J4 265 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 SNX6Q9UNH7 406 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 DLGAP4Q9Y2H0 992 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 MTCL1Q9Y4B5 1905 aaKnown RBP16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 KRT87PA6NCN2 255 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 TTC34A8MYJ7 566 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 AREL1O15033 823 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 SLC16A5O15375 505 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 SGTAO43765 313 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 TULP3O75386 442 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 FGF19O95750 216 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 POLR2EP19388 210 aaKnown RBP16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 NFKBIAP25963 317 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 CYP4F3Q08477 520 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 ZNF77Q15935 545 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 EP400NLQ6ZTU2 488 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 AADATQ8N5Z0 425 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 ZNF557Q8N988 423 aaPredicted RBP16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 VPS50Q96JG6 964 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 MRGPRX3Q96LB0 322 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 CCDC115Q96NT0 180 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 BDH2Q9BUT1 245 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 CLK4Q9HAZ1 481 aaKnown RBP16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 PCDH12Q9NPG4 1184 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 ZNF639Q9UID6 485 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 SLC22A14Q9Y267 594 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 HCFC2Q9Y5Z7 792 aa16.53■□□□□ 0.24
DNMT3A-205ENST00000402667 MYO7AQ13402 2215 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 PABPN1LA6NDY0 278 aaKnown RBP16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 PRAMEF4O60810 478 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 TIMP2P16035 220 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 CYP2A7P20853 494 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 ETV3P41162 512 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 RPS14P62263 151 aaKnown RBP16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 PHC1P78364 1004 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 SP140Q13342 867 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 LSAMPQ13449 338 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 RUNDC3AQ59EK9 446 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 PRAMEF9Q5VWM5 478 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 DNAJC14Q6Y2X3 702 aaPredicted RBP16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 KIAA0907Q7Z7F0 614 aaPredicted RBP16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 TRIML2Q8N7C3 387 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 BEND7Q8N7W2 519 aaPredicted RBP16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 L3MBTL4Q8NA19 623 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 MAGEE2Q8TD90 523 aaPredicted RBP16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 ELMO1Q92556 727 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 GORASP2Q9H8Y8 452 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 IL23AQ9NPF7 189 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 TBC1D14Q9P2M4 693 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 SLC8A2Q9UPR5 921 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 WNT6Q9Y6F9 365 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 LAMA3Q16787 3333 aa16.52■□□□□ 0.24
DNMT3A-205ENST00000402667 CCDC160A6NGH7 325 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 CFAP99D6REC4 459 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 KPNA5O15131 536 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 CLOCKO15516 846 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 GMNNO75496 209 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 ZNF23P17027 643 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 ITPKAP23677 461 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 RPL10P27635 214 aaKnown RBP16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 RPS9P46781 194 aaKnown RBP16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 CLDN8P56748 225 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 DCDC1P59894 354 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 NTHL1P78549 312 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 GTDC1Q4AE62 458 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 ZNF648Q5T619 568 aaPredicted RBP16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 TBPL2Q6SJ96 375 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 ZNF548Q8NEK5 533 aaPredicted RBP16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 HM13Q8TCT9 377 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 MCOLN3Q8TDD5 553 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 CYGBQ8WWM9 190 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 FIG4Q92562 907 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms