RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 RPP25Q9BUL9 199 aaKnown RBP11.95□□□□□ -0.5
CLIP4-203ENST00000401617 RSPH9Q9H1X1 276 aaPredicted RBP11.95□□□□□ -0.5
CLIP4-203ENST00000401617 ACTR8Q9H981 624 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 LEF1Q9UJU2 399 aaPredicted RBP11.95□□□□□ -0.5
CLIP4-203ENST00000401617 PCDHA9Q9Y5H5 950 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 ATG2BQ96BY7 2078 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 CROCCQ5TZA2 2017 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 C17orf113A0A1B0GUU1 675 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 PABPN1LA6NDY0 278 aaKnown RBP11.95□□□□□ -0.5
CLIP4-203ENST00000401617 NME4O00746 187 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 LIN7AO14910 233 aaPredicted RBP11.95□□□□□ -0.5
CLIP4-203ENST00000401617 VEGFDO43915 354 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 UGDHO60701 494 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 C8BP07358 591 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 HSD17B1P14061 328 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 SLC6A2P23975 617 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 MUM1Q2TAK8 710 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 C2orf27AQ580R0 203 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 PAGE3Q5JUK9 113 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 C6orf10Q5SRN2 563 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 RAET1GQ6H3X3 334 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 ADAMTSL4Q6UY14 1074 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 NUDT18Q6ZVK8 323 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 CXorf40AQ8TE69 158 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 ATL1Q8WXF7 558 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 VPS33AQ96AX1 596 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 DUS3LQ96G46 650 aaKnown RBP11.95□□□□□ -0.5
CLIP4-203ENST00000401617 TRMT61BQ9BVS5 477 aaKnown RBP11.95□□□□□ -0.5
CLIP4-203ENST00000401617 OR2AG1Q9H205 316 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 ZDHHC4Q9NPG8 344 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 C6orf203Q9P0P8 240 aaPredicted RBP11.95□□□□□ -0.5
CLIP4-203ENST00000401617 ATXN10Q9UBB4 475 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 GPR34Q9UPC5 381 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 SLC22A14Q9Y267 594 aa11.95□□□□□ -0.5
CLIP4-203ENST00000401617 KRT87PA6NCN2 255 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 CCDC154A6NI56 674 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 CATP04040 527 aaKnown RBP11.94□□□□□ -0.5
CLIP4-203ENST00000401617 SLC2A4P14672 509 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 PDHA2P29803 388 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 TNFRSF4P43489 277 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 CCR3P51677 355 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 TAS2R38P59533 333 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 ZNF33BQ06732 778 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 AGERQ15109 404 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 AGBL4Q5VU57 503 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 TRIM74Q86UV6 250 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 ZNF547Q8IVP9 402 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 AADATQ8N5Z0 425 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 OR56A3Q8NH54 315 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 PYCR2Q96C36 320 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 ACPTQ9BZG2 426 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 LRTM1Q9HBL6 345 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 INTS7Q9NVH2 962 aaKnown RBP11.94□□□□□ -0.5
CLIP4-203ENST00000401617 C1orf109Q9NX04 203 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 CMTM6Q9NX76 183 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 STOX2Q9P2F5 926 aaPredicted RBP11.94□□□□□ -0.5
CLIP4-203ENST00000401617 ZNHIT2Q9UHR6 403 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 SNX6Q9UNH7 406 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 POLR3HQ9Y535 204 aaPredicted RBP11.94□□□□□ -0.5
CLIP4-203ENST00000401617 F5P12259 2224 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 PRSS51A0A1B0GVH4 220 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 TCRBV3S1A0A5B6 114 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 RSL1D1O76021 490 aaKnown RBP11.94□□□□□ -0.5
CLIP4-203ENST00000401617 PDYNP01213 254 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 CAPNS1P04632 268 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 TCN1P20061 433 aaPredicted RBP11.94□□□□□ -0.5
CLIP4-203ENST00000401617 MAP4P27816 1152 aaKnown RBP11.94□□□□□ -0.5
CLIP4-203ENST00000401617 KIR2DL1P43626 348 aaPredicted RBP11.94□□□□□ -0.5
CLIP4-203ENST00000401617 YBX1P67809 324 aaKnown RBP11.94□□□□□ -0.5
CLIP4-203ENST00000401617 MRPS22P82650 360 aaKnown RBP11.94□□□□□ -0.5
CLIP4-203ENST00000401617 HMGCS1Q01581 520 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 PLOD1Q02809 727 aaPredicted RBP11.94□□□□□ -0.5
CLIP4-203ENST00000401617 DLX2Q07687 328 aaPredicted RBP11.94□□□□□ -0.5
CLIP4-203ENST00000401617 E2F2Q14209 437 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 CST6Q15828 149 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 CPSF6Q16630 551 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLIP4-203ENST00000401617 LIPJQ5W064 366 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 AGTRAPQ6RW13 159 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 PRR23BQ6ZRT6 265 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 C11orf96Q7Z7L8 435 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 TMEM126BQ8IUX1 230 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 PQLC1Q8N2U9 271 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 TMEM125Q96AQ2 219 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 HIC2Q96JB3 615 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 RIPOR3Q96MK2 946 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 ZNF184Q99676 751 aaPredicted RBP11.94□□□□□ -0.5
CLIP4-203ENST00000401617 ATG10Q9H0Y0 220 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 PCDHAC1Q9H158 963 aa11.94□□□□□ -0.5
CLIP4-203ENST00000401617 EIF3LQ9Y262 564 aaKnown RBP11.94□□□□□ -0.5
CLIP4-203ENST00000401617 PCM1Q15154 2024 aa11.93□□□□□ -0.5
CLIP4-203ENST00000401617 H3BM21 787 aa11.93□□□□□ -0.5
CLIP4-203ENST00000401617 K7EQS6 105 aa11.93□□□□□ -0.5
CLIP4-203ENST00000401617 MID1O15344 667 aa11.93□□□□□ -0.5
CLIP4-203ENST00000401617 C1orf105O95561 183 aa11.93□□□□□ -0.5
CLIP4-203ENST00000401617 RPSAP08865 295 aaKnown RBP11.93□□□□□ -0.5
CLIP4-203ENST00000401617 JUPP14923 745 aa11.93□□□□□ -0.5
CLIP4-203ENST00000401617 PCSK2P16519 638 aa11.93□□□□□ -0.5
CLIP4-203ENST00000401617 ZNF8P17098 575 aaPredicted RBP11.93□□□□□ -0.5
CLIP4-203ENST00000401617 ITPKAP23677 461 aa11.93□□□□□ -0.5
CLIP4-203ENST00000401617 VARSP26640 1264 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms