RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 CTNNB1P35222 781 aa8.24□□□□□ -1.09
CHD8-201ENST00000399982 TBX4P57082 545 aa8.24□□□□□ -1.09
CHD8-201ENST00000399982 GRIK2Q13002 908 aa8.24□□□□□ -1.09
CHD8-201ENST00000399982 SLC9B1Q4ZJI4 515 aa8.24□□□□□ -1.09
CHD8-201ENST00000399982 CRTC2Q53ET0 693 aaPredicted RBP8.24□□□□□ -1.09
CHD8-201ENST00000399982 ZNF367Q7RTV3 350 aa8.24□□□□□ -1.09
CHD8-201ENST00000399982 OR7G1Q8NGA0 311 aa8.24□□□□□ -1.09
CHD8-201ENST00000399982 MYO19Q96H55 970 aa8.24□□□□□ -1.09
CHD8-201ENST00000399982 MCMBPQ9BTE3 642 aa8.24□□□□□ -1.09
CHD8-201ENST00000399982 LGR4Q9BXB1 951 aa8.24□□□□□ -1.09
CHD8-201ENST00000399982 KCNQ5Q9NR82 932 aa8.24□□□□□ -1.09
CHD8-201ENST00000399982 NFAT5O94916 1531 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 IFNA17P01571 189 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 CD83Q01151 205 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 SF1Q15637 639 aaKnown RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 ANKRD23Q86SG2 305 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 FAM129CQ86XR2 697 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 CCDC71Q8IV32 467 aaPredicted RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 LGI2Q8N0V4 545 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 TMEM199Q8N511 208 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 PIGXQ8TBF5 258 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 SLC7A6OSQ96CW6 309 aaPredicted RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 ASPNQ9BXN1 380 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 FN3KQ9H479 309 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 C3orf14Q9HBI5 128 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 TAS2R3Q9NYW6 316 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 GSKIPQ9P0R6 139 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 COPS7AQ9UBW8 275 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 CA5BQ9Y2D0 317 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 CLDN4O14493 209 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 HOXA2O43364 376 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 XYLBO75191 536 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 LYPLA1O75608 230 aaPredicted RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 ETV1P50549 477 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 IDNKQ5T6J7 187 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 KLHL6Q8WZ60 621 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 ZDHHC15Q96MV8 337 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 ATP13A3Q9H7F0 1226 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 TCF7L1Q9HCS4 588 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 NUFIP1Q9UHK0 495 aaKnown RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 TEX13CA0A0J9YWL9 993 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 A8MVJ9 347 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 IL33O95760 270 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 CYP3A4P08684 503 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 APLP1P51693 650 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 NFKB2Q00653 900 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 RELAQ04206 551 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 TGFBIQ15582 683 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 IFI44LQ53G44 452 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 TAPT1Q6NXT6 567 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 VSTM1Q6UX27 236 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 FAM83HQ6ZRV2 1179 aaPredicted RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 LINC00299Q6ZSB3 139 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 VASH1Q7L8A9 365 aaPredicted RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 DPY19L4Q7Z388 723 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 NUP54Q7Z3B4 507 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 DCP2Q8IU60 420 aaKnown RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 TREX2Q9BQ50 279 aaPredicted RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 BCAS3Q9H6U6 928 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 TMEM134Q9H6X4 195 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 ERVK-5Q9HDB9 667 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 VNN3Q9NY84 501 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 RNF6Q9Y252 685 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 TRPV2Q9Y5S1 764 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 A0A0J9YVX5 310 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 CIB4A0PJX0 185 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 PRORSD1PA6NEY8 169 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 BMP6P22004 513 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 AZGP1P25311 298 aaKnown RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 DDX6P26196 483 aaKnown RBP eCLIP8.23□□□□□ -1.091e-6■■■■□ 24.4
CHD8-201ENST00000399982 ENTPD1P49961 510 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 SMARCD3Q6STE5 483 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 CEP97Q8IW35 865 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 SLC44A3Q8N4M1 653 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 TRMT10AQ8TBZ6 339 aaKnown RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 DCAKDQ8WVC6 231 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 RIPOR3Q96MK2 946 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 POLR2J2Q9GZM3 115 aaKnown RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 FAM83DQ9H4H8 585 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 BPIFA1Q9NP55 256 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 TMEM39AQ9NV64 488 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 ZIM2Q9NZV7 527 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 FUOMA2VDF0 154 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 E7EQ34 232 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 INMT-MINDY4F8WBC2 141 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 C2P06681 752 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 COL6A1P12109 1028 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 TUBP50607 506 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 NOMO1Q15155 1222 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 PLGLAQ15195 96 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 DPY19L3Q6ZPD9 716 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 ILDR1Q86SU0 546 aaPredicted RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 SP8Q8IXZ3 490 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 AVL9Q8NBF6 648 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 OR10T2Q8NGX3 314 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 MFSD8Q8NHS3 518 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 NINJ1Q92982 152 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 MKRN2Q9H000 416 aaKnown RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 HCN2Q9UL51 889 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 GPR75-ASB3A0A0A6YYF3 556 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms