RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 PPM1BO75688 479 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 NFICP08651 508 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 TGM1P22735 817 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 CLCN3P51790 818 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 ATP6AP1Q15904 470 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 CES4AQ5XG92 561 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 SLC9A7Q96T83 725 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 ANKRA2Q9H9E1 313 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 CLN6Q9NWW5 311 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 DDIT4Q9NX09 232 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 SLC39A1Q9NY26 324 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 MAP3K20Q9NYL2 800 aaKnown RBP13.48□□□□□ -0.25
RUNX3-203ENST00000399916 CDV3Q9UKY7 258 aaKnown RBP13.48□□□□□ -0.25
RUNX3-203ENST00000399916 ZNF451Q9Y4E5 1061 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 SLC35F4A4IF30 521 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 KCNK2O95069 426 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 OGNP20774 298 aaKnown RBP13.48□□□□□ -0.25
RUNX3-203ENST00000399916 IMPDH1P20839 514 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 AKAP5P24588 427 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 MAP2K3P46734 347 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 TPMTP51580 245 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 OR4D2P58180 307 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 TATDN3Q17R31 274 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 CRTC2Q53ET0 693 aaPredicted RBP13.48□□□□□ -0.25
RUNX3-203ENST00000399916 NXNL2Q5VZ03 156 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 EEF1DP3Q658K8 133 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 PYROXD2Q8N2H3 581 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 BEND7Q8N7W2 519 aaPredicted RBP13.48□□□□□ -0.25
RUNX3-203ENST00000399916 ST8SIA4Q92187 359 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 FTHL17Q9BXU8 183 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 RNF121Q9H920 327 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 H2AFY2Q9P0M6 372 aaPredicted RBP13.48□□□□□ -0.25
RUNX3-203ENST00000399916 SLC13A4Q9UKG4 626 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 L7N2F9 121 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 ACOT8O14734 319 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 ITGA2P17301 1181 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 NKX3-2P78367 333 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 CNTN2Q02246 1040 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 PLD1Q13393 1074 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 DENND1CQ8IV53 801 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 NIPA2Q8N8Q9 360 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 PNPLA1Q8N8W4 532 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 BTN2A2Q8WVV5 523 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 TRIM43Q96BQ3 446 aaPredicted RBP13.48□□□□□ -0.25
RUNX3-203ENST00000399916 AURKBQ96GD4 344 aaPredicted RBP13.48□□□□□ -0.25
RUNX3-203ENST00000399916 ACO2Q99798 780 aaKnown RBP13.48□□□□□ -0.25
RUNX3-203ENST00000399916 TMEM39AQ9NV64 488 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 NT5C1B-RDH14C9J2C7 533 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 PRSS44E7EML9 344 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 ARVCFO00192 962 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 SMAD9O15198 467 aaKnown RBP13.48□□□□□ -0.25
RUNX3-203ENST00000399916 PEX10O60683 326 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 ECDO95905 644 aaPredicted RBP13.48□□□□□ -0.25
RUNX3-203ENST00000399916 HRGP04196 525 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 STSP08842 583 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 CKMT1AP12532 417 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 CFL1P23528 166 aaKnown RBP13.48□□□□□ -0.25
RUNX3-203ENST00000399916 S100A3P33764 101 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 EIF2DP41214 584 aaKnown RBP13.48□□□□□ -0.25
RUNX3-203ENST00000399916 CCDC157Q569K6 752 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 OXR1Q8N573 874 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 OR52E6Q96RD3 313 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 SPON2Q9BUD6 331 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 CLPBQ9H078 707 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 TBC1D17Q9HA65 648 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 INTS6Q9UL03 887 aaKnown RBP13.48□□□□□ -0.25
RUNX3-203ENST00000399916 TMCC3Q9ULS5 477 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 USP22Q9UPT9 525 aa13.48□□□□□ -0.25
RUNX3-203ENST00000399916 TEX51A0A1B0GUA7 166 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 TLL1O43897 1013 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 SSX4O60224 188 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 GLAP06280 429 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 CBR1P16152 277 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 CD72P21854 359 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 TGFBR2P37173 567 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 CENPAP49450 140 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 LAMTOR4Q0VGL1 99 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 GRM7Q14831 915 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 HSDL1Q3SXM5 330 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 LRRC66Q68CR7 880 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 SPPL2BQ8TCT7 592 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 HYLS1Q96M11 299 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 ELOVL4Q9GZR5 314 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 IFT22Q9H7X7 185 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 INTS7Q9NVH2 962 aaKnown RBP13.47□□□□□ -0.25
RUNX3-203ENST00000399916 FXYD6-FXYD2A0A087WZ82 144 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 LOC105369274A0A096LPK9 316 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 YDJCA8MPS7 323 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 TULP3O75386 442 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 PIRTP0C851 137 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 PVALBP20472 110 aaPredicted RBP13.47□□□□□ -0.25
RUNX3-203ENST00000399916 BMPR1AP36894 532 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 UFM1P61960 85 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 CTBSQ01459 385 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 APOBEC3FQ8IUX4 373 aaKnown RBP13.47□□□□□ -0.25
RUNX3-203ENST00000399916 OR4N4Q8N0Y3 316 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 ZNF557Q8N988 423 aaPredicted RBP13.47□□□□□ -0.25
RUNX3-203ENST00000399916 TRPV1Q8NER1 839 aa13.47□□□□□ -0.25
RUNX3-203ENST00000399916 DNAJA4Q8WW22 397 aaPredicted RBP13.47□□□□□ -0.25
RUNX3-203ENST00000399916 USP7Q93009 1102 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms