RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 OR4L1Q8NH43 312 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 IGDCC4Q8TDY8 1250 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 NTAN1Q96AB6 310 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 BOD1Q96IK1 185 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 KCNC2Q96PR1 638 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 ASPNQ9BXN1 380 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 KCND1Q9NSA2 647 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 DDX28Q9NUL7 540 aaKnown RBP2.68□□□□□ -1.98
CHD9-202ENST00000398510 REV1Q9UBZ9 1251 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 NUP214P35658 2090 aaPredicted RBP2.68□□□□□ -1.98
CHD9-202ENST00000398510 PROSCO94903 275 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 RHOQP17081 205 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 RORAP35398 523 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 UGT1A3P35503 534 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 CXCR3P49682 368 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 CRISP3P54108 245 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 TUBA3CQ13748 450 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 SWI5Q1ZZU3 235 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 ABHD17BQ5VST6 288 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 FIGNL1Q6PIW4 674 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 DHFR2Q86XF0 187 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 NRSN1Q8IZ57 195 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 FAM71DQ8N9W8 422 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 ZSWIM2Q8NEG5 633 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 TOR1AIP2Q8NFQ8 470 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 ITFG1Q8TB96 612 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 SYTL5Q8TDW5 730 aaPredicted RBP2.68□□□□□ -1.98
CHD9-202ENST00000398510 TMEM143Q96AN5 459 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 COX4I2Q96KJ9 171 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 NECAB3Q96P71 396 aaPredicted RBP2.68□□□□□ -1.98
CHD9-202ENST00000398510 PANX1Q96RD7 426 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 PRMT1Q99873 361 aaKnown RBP2.68□□□□□ -1.98
CHD9-202ENST00000398510 DESI2Q9BSY9 194 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 ACTR6Q9GZN1 396 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 TRIM36Q9NQ86 728 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 AGPAT5Q9NUQ2 364 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 ETNK2Q9NVF9 386 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 TUBA8Q9NY65 449 aaPredicted RBP2.68□□□□□ -1.98
CHD9-202ENST00000398510 NLGN3Q9NZ94 848 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 COL20A1Q9P218 1284 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 NUDT5Q9UKK9 219 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 PPIEQ9UNP9 301 aaKnown RBP2.68□□□□□ -1.98
CHD9-202ENST00000398510 OR6C70A6NIJ9 312 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 PDPK1O15530 556 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 IL33O95760 270 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 MYCP01106 439 aaPredicted RBP2.68□□□□□ -1.98
CHD9-202ENST00000398510 MT-ND2P03891 347 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 UROSP10746 265 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 CXCR1P25024 350 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 ECI1P42126 302 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 ALDH9A1P49189 494 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 CLCN2P51788 898 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 GALCP54803 685 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 DIO3P55073 304 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 HSF2Q03933 536 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 SMAGPQ0VAQ4 97 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 BLMHQ13867 455 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 E2F2Q14209 437 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 NR1I3Q14994 352 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 PAN3Q58A45 887 aaKnown RBP2.68□□□□□ -1.98
CHD9-202ENST00000398510 FAM209AQ5JX71 171 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 NAIF1Q69YI7 327 aaPredicted RBP2.68□□□□□ -1.98
CHD9-202ENST00000398510 LBX2Q6XYB7 198 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 G2E3Q7L622 706 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 MTDHQ86UE4 582 aaKnown RBP2.68□□□□□ -1.98
CHD9-202ENST00000398510 CERS5Q8N5B7 392 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 SETD7Q8WTS6 366 aaKnown RBP2.68□□□□□ -1.98
CHD9-202ENST00000398510 HMGB4Q8WW32 186 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 TOP1MTQ969P6 601 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 GTPBP3Q969Y2 492 aaKnown RBP2.68□□□□□ -1.98
CHD9-202ENST00000398510 DDIT4LQ96D03 193 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 BORCS8Q96FH0 119 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 PTCHD1Q96NR3 888 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 SERINC2Q96SA4 455 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 EHD1Q9H4M9 534 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 IGFLR1Q9H665 355 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 FAM86C1Q9NVL1 165 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.68□□□□□ -1.98
CHD9-202ENST00000398510 COPZ2Q9P299 210 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 SLC7A11Q9UPY5 501 aa2.68□□□□□ -1.98
CHD9-202ENST00000398510 MAGED1Q9Y5V3 778 aaPredicted RBP2.68□□□□□ -1.98
CHD9-202ENST00000398510 LOC102725191A0A1B0GVB3 256 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 ARHGEF33A8MVX0 844 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 NPIPA5E9PKD4 350 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 USP2O75604 605 aaPredicted RBP2.67□□□□□ -1.98
CHD9-202ENST00000398510 PRAMEF1O95521 474 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 HSD3B1P14060 373 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 IFNGR1P15260 489 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 ATP6V1B1P15313 513 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 TPSB2P20231 275 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 HSD3B2P26439 372 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 OMPP47874 163 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 ID4P47928 161 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 UCNP55089 124 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 PSME3P61289 254 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 C2orf54Q08AI8 447 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 TPSAB1Q15661 275 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 MIIPQ5JXC2 388 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 PHF19Q5T6S3 580 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 C3orf33Q6P1S2 294 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms