RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SMU1Q2TAY7 513 aa15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 MFSD14CQ5VZR4 134 aa15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 LETMD1Q6P1Q0 360 aa15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 IL27RAQ6UWB1 636 aa15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 PRR23BQ6ZRT6 265 aa15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 GPSM1Q86YR5 675 aa15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 ZDHHC13Q8IUH4 622 aa15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 CFAP52Q8N1V2 620 aa15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 KLHDC9Q8NEP7 349 aa15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 RORBQ92753 470 aa15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 PEX13Q92968 403 aa15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 LINGO1Q96FE5 620 aa15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 CCDC90BQ9GZT6 254 aa15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 GIMAP4Q9NUV9 329 aa15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 SCML2Q9UQR0 700 aa15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 POLR3HQ9Y535 204 aaPredicted RBP15.66■□□□□ 0.1
CHMP1A-201ENST00000397901 IGLV3-10A0A075B6K4 115 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 ZBBXA8MT70 800 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 G3V2T6 193 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 GPR182O15218 404 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 ADAMTS4O75173 837 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 TULP3O75386 442 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 HPRP00739 348 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 PIGAP37287 484 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 ZNF140P52738 457 aaPredicted RBP15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 FCHO2Q0JRZ9 810 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 EPS8Q12929 822 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 TUSC3Q13454 348 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 GLT6D1Q7Z4J2 308 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 CCDC28AQ8IWP9 274 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 ZNF555Q8NEP9 628 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 MCFD2Q8NI22 146 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 SDCCAG3Q96C92 435 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 NLE1Q9NVX2 485 aaPredicted RBP15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 FKBP14Q9NWM8 211 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 FAM118AQ9NWS6 357 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 COMMD8Q9NX08 183 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 ADPRHL2Q9NX46 363 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 KCNN3Q9UGI6 736 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 TRMT6Q9UJA5 497 aaKnown RBP15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 A0A0D9SEW6 157 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 FAM25AB3EWG3 89 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 FAM25CB3EWG5 89 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 FAM25GB3EWG6 89 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 E2F3O00716 465 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 PRAMEF11O60813 436 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 CAPN1P07384 714 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 PKLRP30613 574 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 EMX1Q04741 257 aaPredicted RBP15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 NR6A1Q15406 480 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 NKG7Q16617 165 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 PARP15Q460N3 678 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 PSAPL1Q6NUJ1 521 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 TXNDC11Q6PKC3 985 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 AFTPHQ6ULP2 937 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 UTS2BQ765I0 119 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 PIANPQ8IYJ0 282 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 NKAPQ8N5F7 415 aaKnown RBP15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 DPP10Q8N608 796 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 METTL6Q8TCB7 284 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 SUSD3Q96L08 255 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 ACTL8Q9H568 366 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 EXD2Q9NVH0 621 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 PADI3Q9ULW8 664 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 SPEF1Q9Y4P9 236 aa15.65■□□□□ 0.1
CHMP1A-201ENST00000397901 ANKRD36A6QL64 1941 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 SLC1A7O00341 560 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 GSTA4O15217 222 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 SEPT4O43236 478 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 DFNA5O60443 496 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 ZNF623O75123 536 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 KATNA1O75449 491 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 TSPAN12O95859 305 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 CNPP09543 421 aaKnown RBP15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 GGT1P19440 569 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 AGXTP21549 392 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 CTU2Q2VPK5 515 aaKnown RBP15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 SULT1C3Q6IMI6 304 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 CYP20A1Q6UW02 462 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 PLD3Q8IV08 490 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 TTC9BQ8N6N2 239 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 SLC43A3Q8NBI5 491 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 MDGA1Q8NFP4 955 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 JPH3Q8WXH2 748 aaPredicted RBP15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 MBOAT4Q96T53 435 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 C1QTNF3Q9BXJ4 246 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 C12orf10Q9HB07 376 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 LIMD1Q9UGP4 676 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 OSGIN1Q9UJX0 560 aa15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 FBXO9Q9UK97 447 aaPredicted RBP15.64■□□□□ 0.09
CHMP1A-201ENST00000397901 A0A0U1RQS6 177 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 SLC12A8A0AV02 714 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 PTGES3LE9PB15 166 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 KLK8O60259 260 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 VPS26AO75436 327 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 PRSS23O95084 383 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 ACVR2AP27037 513 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 RGRP47804 291 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 SREBF2Q12772 1141 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 DSC3Q14574 896 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms