RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 NTMT1Q9BV86 223 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ZDHHC6Q9H6R6 413 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CARS2Q9HA77 564 aaKnown RBP17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 NTN4Q9HB63 628 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 LRTM1Q9HBL6 345 aa17.93■□□□□ 0.46
CHRFAM7A-202ENST00000397827 EBLN1P0CF75 366 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CDH1P12830 882 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 EPORP19235 508 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 GGT1P19440 569 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SNRPD1P62314 119 aaKnown RBP17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ERI1Q8IV48 349 aaKnown RBP17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CBARPQ8N350 705 aaPredicted RBP17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 OSCP1Q8WVF1 389 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 MYLIPQ8WY64 445 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 COPS8Q99627 209 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 BDH2Q9BUT1 245 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 RNF208Q9H0X6 261 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ACTR8Q9H981 624 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SLC25A37Q9NYZ2 338 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 RSL24D1Q9UHA3 163 aaKnown RBP17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ZNF106Q9H2Y7 1883 aaKnown RBP17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 AGAP14A8MT82 685 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SLC28A1O00337 649 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 UGT2B4P06133 528 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 PGRP06401 933 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ANXA6P08133 673 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 AKT1P31749 480 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TUBA4AP68366 448 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ZIK1Q3SY52 487 aaPredicted RBP17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TRIM46Q7Z4K8 759 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SLC7A5P1Q8MH63 180 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CPXM2Q8N436 756 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 OR2T12Q8NG77 320 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 FBXO30Q8TB52 745 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 PYCR2Q96C36 320 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SUV39H2Q9H5I1 410 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 PAK6Q9NQU5 681 aaPredicted RBP17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SLC6A13Q9NSD5 602 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ZDHHC3Q9NYG2 299 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 PDE10AQ9Y233 779 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CCL26Q9Y258 94 aa17.92■□□□□ 0.46
CHRFAM7A-202ENST00000397827 LEFTY2O00292 366 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 MTX2O75431 263 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ANXA5P08758 320 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 HOXD11P31277 338 aaPredicted RBP17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CAPGP40121 348 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 NEK2P51955 445 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 LPCAT2Q7L5N7 544 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TMC8Q8IU68 726 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 MSRB3Q8IXL7 192 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 PHACTR4Q8IZ21 702 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 OR8J3Q8NGG0 315 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 LYSMD1Q96S90 227 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 RDH14Q9HBH5 336 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 KCTD5Q9NXV2 234 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SLCO3A1Q9UIG8 710 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 IFRD1O00458 451 aaPredicted RBP17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TCF3P15923 654 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CACHD1Q5VU97 1274 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ENPP6Q6UWR7 440 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 DPY19L3Q6ZPD9 716 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 PRR23BQ6ZRT6 265 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 VRK3Q8IV63 474 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 UBTD2Q8WUN7 234 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 BEGAINQ9BUH8 593 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SLC46A2Q9BY10 475 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ACPTQ9BZG2 426 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TRPS1Q9UHF7 1281 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 UTS2RQ9UKP6 389 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 GPC6Q9Y625 555 aaPredicted RBP17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 EIF3FO00303 357 aaPredicted RBP17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 UPK1AO00322 258 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 PARNO95453 639 aaKnown RBP17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CLDN9O95484 217 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 B3GALT4O96024 378 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 PDYNP01213 254 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 LRG1P02750 347 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 YAP1P46937 504 aaKnown RBP17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SLC7A9P82251 487 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CYP4F3Q08477 520 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 MPP7Q5T2T1 576 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 C22orf39Q6P5X5 142 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 USP45Q70EL2 814 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 UBE2R2Q712K3 238 aaPredicted RBP17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 USP7Q93009 1102 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TMBIM1Q969X1 311 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 OR52E6Q96RD3 313 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 OSBPL6Q9BZF3 934 aa17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 RC3H2Q9HBD1 1191 aaKnown RBP17.91■□□□□ 0.46
CHRFAM7A-202ENST00000397827 AREL1O15033 823 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 GSTA4O15217 222 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 BMP10O95393 424 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 OCM2P0CE71 109 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 OCMP0CE72 109 aaPredicted RBP17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 BCKDHAP12694 445 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 EIF2B2P49770 351 aaKnown RBP17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 IST1P53990 364 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 MAD2L1Q13257 205 aaPredicted RBP17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ASTLQ6HA08 431 aaPredicted RBP17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ELMSAN1Q6PJG2 1045 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms