RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 TRIM4Q9C037 500 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 HIPK3Q9H422 1215 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 CYP3A43Q9HB55 503 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 EPB41L5Q9HCM4 733 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 KLHL8Q9P2G9 620 aaPredicted RBP6.6□□□□□ -1.35
SMCO1-201ENST00000397537 MTRF1LQ9UGC7 380 aaKnown RBP6.6□□□□□ -1.35
SMCO1-201ENST00000397537 CDC42EP3Q9UKI2 254 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 PIK3C2AO00443 1686 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 COL18A1P39060 1754 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 TARM1B6A8C7 271 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 KLRF2D3W0D1 207 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 NPIPB11E5RHQ5 1161 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 HBP1O60381 514 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 CSDE1O75534 798 aaKnown RBP6.6□□□□□ -1.35
SMCO1-201ENST00000397537 CRYGCP07315 174 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 CYP19A1P11511 503 aaPredicted RBP6.6□□□□□ -1.35
SMCO1-201ENST00000397537 RANBP1P43487 201 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 KIR2DL3P43628 341 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 GLRBP48167 497 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 GRIK4Q16099 956 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 DECR1Q16698 335 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 Q4G0T1 1027 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 NKAIN1Q4KMZ8 207 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 MPPE1Q53F39 396 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 SOWAHCQ53LP3 525 aaPredicted RBP6.6□□□□□ -1.35
SMCO1-201ENST00000397537 LAYNQ6UX15 382 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 C1orf229Q6ZS94 237 aaPredicted RBP6.6□□□□□ -1.35
SMCO1-201ENST00000397537 OTOP2Q7RTS6 562 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 ARHGAP22Q7Z5H3 698 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 TDRPQ86YL5 185 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 FBXO39Q8N4B4 442 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 MINDY2Q8NBR6 621 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 NSUN7Q8NE18 718 aaKnown RBP6.6□□□□□ -1.35
SMCO1-201ENST00000397537 CLHC1Q8NHS4 586 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 POC1BQ8TC44 478 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 LZICQ8WZA0 190 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 FAM46BQ96A09 425 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 KIAA1143Q96AT1 154 aaPredicted RBP6.6□□□□□ -1.35
SMCO1-201ENST00000397537 SHISA4Q96DD7 197 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 MAGED4Q96JG8 741 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 PDLIM2Q96JY6 352 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 OR1F2PQ96R84 312 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 MRPL18Q9H0U6 180 aaKnown RBP6.6□□□□□ -1.35
SMCO1-201ENST00000397537 ACTR8Q9H981 624 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 BATF3Q9NR55 127 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 SDHAF3Q9NRP4 125 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 SLCO1C1Q9NYB5 712 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 VSX1Q9NZR4 365 aaPredicted RBP6.6□□□□□ -1.35
SMCO1-201ENST00000397537 SLC24A2Q9UI40 661 aa6.6□□□□□ -1.35
SMCO1-201ENST00000397537 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.6□□□□□ -1.35
SMCO1-201ENST00000397537 TMEM184BQ9Y519 407 aaPredicted RBP6.6□□□□□ -1.35
SMCO1-201ENST00000397537 PPLO60437 1756 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 A0A0C4DFX4 3053 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 YTHDC2Q9H6S0 1430 aaKnown RBP6.59□□□□□ -1.35
SMCO1-201ENST00000397537 NUP155O75694 1391 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 A0A0G2JNJ9 132 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 TTC34A8MYJ7 566 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 MAGEB2O15479 319 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 ARHGEF9O43307 516 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 ATP6V1G1O75348 118 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 RSL1D1O76021 490 aaKnown RBP6.59□□□□□ -1.35
SMCO1-201ENST00000397537 AMHP03971 560 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 UGT2B4P06133 528 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 HOXD9P28356 352 aaPredicted RBP6.59□□□□□ -1.35
SMCO1-201ENST00000397537 BLVRAP53004 296 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 FOLH1Q04609 750 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 PPP1R8Q12972 351 aaKnown RBP6.59□□□□□ -1.35
SMCO1-201ENST00000397537 PPIL2Q13356 520 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 KRT31Q15323 416 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 CHRNA6Q15825 494 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 CR1LQ2VPA4 569 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 CDONQ4KMG0 1287 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 PIP5KL1Q5T9C9 394 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 KIAA1161Q6NSJ0 714 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 TMEM108Q6UXF1 575 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 SERINC5Q86VE9 423 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 LRRC56Q8IYG6 542 aaPredicted RBP6.59□□□□□ -1.35
SMCO1-201ENST00000397537 SYCE1Q8N0S2 351 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 CENPLQ8N0S6 344 aaPredicted RBP6.59□□□□□ -1.35
SMCO1-201ENST00000397537 SYNE4Q8N205 404 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 DTX3Q8N9I9 347 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 RDM1Q8NG50 284 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 TAS1R2Q8TE23 839 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 OIT3Q8WWZ8 545 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 LIN37Q96GY3 246 aaPredicted RBP6.59□□□□□ -1.35
SMCO1-201ENST00000397537 OXNAD1Q96HP4 312 aaPredicted RBP6.59□□□□□ -1.35
SMCO1-201ENST00000397537 SMC6Q96SB8 1091 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 C12orf65Q9H3J6 166 aaKnown RBP6.59□□□□□ -1.35
SMCO1-201ENST00000397537 PCDH18Q9HCL0 1135 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 NRBP2Q9NSY0 501 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 ASNSD1Q9NWL6 643 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 TRPM5Q9NZQ8 1165 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 NDUFA13Q9P0J0 144 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 RNF181Q9P0P0 153 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 Q9UFV3 132 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 MGAT4BQ9UQ53 548 aa6.59□□□□□ -1.35
SMCO1-201ENST00000397537 FAM95CA0A1B0GW59 222 aa6.58□□□□□ -1.36
SMCO1-201ENST00000397537 A0A1W2PQJ5 194 aa6.58□□□□□ -1.36
SMCO1-201ENST00000397537 C4orf47A7E2U8 309 aa6.58□□□□□ -1.36
SMCO1-201ENST00000397537 KIAA1324LA8MWY0 1029 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms