RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 CDKL1Q00532 357 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 KIF19Q2TAC6 998 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 ZNF528Q3MIS6 628 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 CRLF3Q8IUI8 442 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 SYTL1Q8IYJ3 562 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 TEX9Q8N6V9 391 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 ZNF781Q8N8C0 355 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 OR9A1PQ8NGU1 263 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 CNDP1Q96KN2 507 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 CD244Q9BZW8 370 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 OPTCQ9UBM4 332 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 FIS1Q9Y3D6 152 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 TNPO3Q9Y5L0 923 aaKnown RBP20.61■□□□□ 0.89
CPNE1-204ENST00000397443 SNX11Q9Y5W9 270 aa20.61■□□□□ 0.89
CPNE1-204ENST00000397443 FRYLO94915 3013 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 E2F3O00716 465 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 NPHS1O60500 1241 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 STK16O75716 305 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 RPN2P04844 631 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 IMPA1P29218 277 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 CLCQ05315 142 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 RBBP7Q16576 425 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 PTCHD3Q3KNS1 767 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 AGTRAPQ6RW13 159 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 DCBLD1Q8N8Z6 715 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 ZBTB44Q8NCP5 570 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 MAGEC3Q8TD91 643 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 ELAC2Q9BQ52 826 aaKnown RBP20.6■□□□□ 0.89
CPNE1-204ENST00000397443 NPHS2Q9NP85 383 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 PNPOQ9NVS9 261 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 ANGPTL3Q9Y5C1 460 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 KMT2EQ8IZD2 1858 aa20.6■□□□□ 0.89
CPNE1-204ENST00000397443 TNRC6BQ9UPQ9 1833 aaKnown RBP20.6■□□□□ 0.89
CPNE1-204ENST00000397443 CABIN1Q9Y6J0 2220 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 UBFD1O14562 309 aaKnown RBP20.59■□□□□ 0.89
CPNE1-204ENST00000397443 CFIP05156 583 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 F3P13726 295 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 CNR2P34972 360 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 HNMTP50135 292 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 NAE1Q13564 534 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 PCBP2Q15366 365 aaKnown RBP eCLIP20.59■□□□□ 0.895e-8■■□□□ 12.6
CPNE1-204ENST00000397443 CGB2Q6NT52 195 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 ABRAXAS1Q6UWZ7 409 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 TBC1D21Q8IYX1 336 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 FAM46DQ8NEK8 389 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 BCAS4Q8TDM0 211 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 JPH3Q8WXH2 748 aaPredicted RBP20.59■□□□□ 0.89
CPNE1-204ENST00000397443 RAD51AP1Q96B01 352 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 FBXL8Q96CD0 374 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 C7orf26Q96N11 449 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 COL25A1Q9BXS0 654 aaPredicted RBP20.59■□□□□ 0.89
CPNE1-204ENST00000397443 NSRP1Q9H0G5 558 aaKnown RBP20.59■□□□□ 0.89
CPNE1-204ENST00000397443 ZBTB26Q9HCK0 441 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 DOLKQ9UPQ8 538 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 A0A1B0GTL3 188 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 PRR5-ARHGAP8B1AHC4 643 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 MYO1CO00159 1063 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 WDR47O94967 919 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 MTHFD1P11586 935 aaKnown RBP20.59■□□□□ 0.89
CPNE1-204ENST00000397443 GTF2H2Q13888 395 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 GTF2H2CQ6P1K8 395 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 GOLGA7Q7Z5G4 137 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 ZNF483Q8TF39 744 aaPredicted RBP20.59■□□□□ 0.89
CPNE1-204ENST00000397443 ZNF480Q8WV37 535 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 ZC3H10Q96K80 434 aaKnown RBP20.59■□□□□ 0.89
CPNE1-204ENST00000397443 TNFRSF12AQ9NP84 129 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 PSD3Q9NYI0 1048 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 ZNF624Q9P2J8 865 aaPredicted RBP20.59■□□□□ 0.89
CPNE1-204ENST00000397443 R4GN57 208 aa20.59■□□□□ 0.89
CPNE1-204ENST00000397443 B4DGG1 531 aa20.58■□□□□ 0.88
CPNE1-204ENST00000397443 FASTKQ14296 549 aaKnown RBP20.58■□□□□ 0.88
CPNE1-204ENST00000397443 GRB7Q14451 532 aa20.58■□□□□ 0.88
CPNE1-204ENST00000397443 ELOCQ15369 112 aa20.58■□□□□ 0.88
CPNE1-204ENST00000397443 SH2D4BQ5SQS7 431 aa20.58■□□□□ 0.88
CPNE1-204ENST00000397443 CUZD1Q86UP6 607 aa20.58■□□□□ 0.88
CPNE1-204ENST00000397443 SYT12Q8IV01 421 aa20.58■□□□□ 0.88
CPNE1-204ENST00000397443 TCAIMQ8N3R3 496 aa20.58■□□□□ 0.88
CPNE1-204ENST00000397443 SNX31Q8N9S9 440 aa20.58■□□□□ 0.88
CPNE1-204ENST00000397443 FBXO15Q8NCQ5 510 aaPredicted RBP20.58■□□□□ 0.88
CPNE1-204ENST00000397443 CXorf40BQ96DE9 158 aa20.58■□□□□ 0.88
CPNE1-204ENST00000397443 CDK15Q96Q40 435 aa20.58■□□□□ 0.88
CPNE1-204ENST00000397443 ILKAPQ9H0C8 392 aaPredicted RBP20.58■□□□□ 0.88
CPNE1-204ENST00000397443 XKR8Q9H6D3 395 aa20.58■□□□□ 0.88
CPNE1-204ENST00000397443 NOL11Q9H8H0 719 aaKnown RBP20.58■□□□□ 0.88
CPNE1-204ENST00000397443 MID1IP1Q9NPA3 183 aa20.58■□□□□ 0.88
CPNE1-204ENST00000397443 SUSD2Q9UGT4 822 aa20.58■□□□□ 0.88
CPNE1-204ENST00000397443 ZDHHC2Q9UIJ5 367 aa20.58■□□□□ 0.88
CPNE1-204ENST00000397443 SLC22A14Q9Y267 594 aa20.58■□□□□ 0.88
CPNE1-204ENST00000397443 TMEM131Q92545 1883 aa20.57■□□□□ 0.88
CPNE1-204ENST00000397443 A6NCN8 305 aa20.57■□□□□ 0.88
CPNE1-204ENST00000397443 TMEM233B4DJY2 109 aa20.57■□□□□ 0.88
CPNE1-204ENST00000397443 NDUFAB1O14561 156 aa20.57■□□□□ 0.88
CPNE1-204ENST00000397443 FAM107AO95990 144 aa20.57■□□□□ 0.88
CPNE1-204ENST00000397443 PRDX3P30048 256 aaKnown RBP20.57■□□□□ 0.88
CPNE1-204ENST00000397443 HNRNPKP61978 463 aaKnown RBP eCLIP20.57■□□□□ 0.88
CPNE1-204ENST00000397443 BNC1Q01954 994 aa20.57■□□□□ 0.88
CPNE1-204ENST00000397443 CDKL4Q5MAI5 379 aa20.57■□□□□ 0.88
CPNE1-204ENST00000397443 SUSD1Q6UWL2 747 aa20.57■□□□□ 0.88
CPNE1-204ENST00000397443 OR52B6Q8NGF0 335 aa20.57■□□□□ 0.88
CPNE1-204ENST00000397443 UBTD2Q8WUN7 234 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms