RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 U3KQA8 63 aa22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 NUDT21O43809 227 aaKnown RBP22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 KDM1AO60341 852 aa22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 KERAO60938 352 aa22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 GLB1P16278 677 aa22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 ID4P47928 161 aa22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 KCNC1P48547 511 aa22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 GRB7Q14451 532 aa22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 PLCL1Q15111 1095 aa22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 OR6C4Q8NGE1 309 aa22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 ATOH8Q96SQ7 321 aa22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 SLC38A3Q99624 504 aa22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 MRPL57Q9BQC6 102 aaKnown RBP22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 MRPL46Q9H2W6 279 aaKnown RBP22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 ARL15Q9NXU5 204 aa22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 XPR1Q9UBH6 696 aa22.93■■□□□ 1.26
TSPAN4-203ENST00000397397 CPED1A4D0V7 1026 aa22.92■■□□□ 1.26
TSPAN4-203ENST00000397397 SUPT3HB4E1H0 165 aa22.92■■□□□ 1.26
TSPAN4-203ENST00000397397 MYO1CO00159 1063 aa22.92■■□□□ 1.26
TSPAN4-203ENST00000397397 SUPT3HO75486 399 aa22.92■■□□□ 1.26
TSPAN4-203ENST00000397397 GUCA1CO95843 209 aa22.92■■□□□ 1.26
TSPAN4-203ENST00000397397 TPBGLP0DKB5 382 aa22.92■■□□□ 1.26
TSPAN4-203ENST00000397397 CKMT1AP12532 417 aa22.92■■□□□ 1.26
TSPAN4-203ENST00000397397 DUSP3P51452 185 aaPredicted RBP22.92■■□□□ 1.26
TSPAN4-203ENST00000397397 MBOAT1Q6ZNC8 495 aa22.92■■□□□ 1.26
TSPAN4-203ENST00000397397 LCN9Q8WX39 176 aa22.92■■□□□ 1.26
TSPAN4-203ENST00000397397 CCDC138Q96M89 665 aa22.92■■□□□ 1.26
TSPAN4-203ENST00000397397 UCK1Q9HA47 277 aa22.92■■□□□ 1.26
TSPAN4-203ENST00000397397 RDH14Q9HBH5 336 aa22.92■■□□□ 1.26
TSPAN4-203ENST00000397397 SSU72Q9NP77 194 aaKnown RBP22.92■■□□□ 1.26
TSPAN4-203ENST00000397397 COL5A1P20908 1838 aaPredicted RBP22.92■■□□□ 1.26
TSPAN4-203ENST00000397397 NCF1BA6NI72 391 aaPredicted RBP22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 SYCE1LA8MT33 242 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 NCF1CA8MVU1 366 aaPredicted RBP22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 S100BP04271 92 aaPredicted RBP22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 NCF1P14598 390 aaPredicted RBP22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 LIMK1P53667 647 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 AP1S2P56377 157 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 TGFBIQ15582 683 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 GUSBP11Q6P575 273 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 RAB42Q8N4Z0 105 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 CCDC74AQ96AQ1 378 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 NRTNQ99748 197 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 EGFL8Q99944 293 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 TBC1D10AQ9BXI6 508 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 C12orf65Q9H3J6 166 aaKnown RBP22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 XKR8Q9H6D3 395 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 KCNK9Q9NPC2 374 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 CD274Q9NZQ7 290 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 CPSF2Q9P2I0 782 aaKnown RBP22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 EMCNQ9ULC0 261 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 ICKQ9UPZ9 632 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 DNAH14Q0VDD8 3507 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 GOLGA4Q13439 2230 aaKnown RBP22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 EME2A4GXA9 379 aaPredicted RBP22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 HMGB1P1B2RPK0 211 aaPredicted RBP22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 UBXN8O00124 270 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 TK2O00142 265 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 TYROBPO43914 113 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 CDKL1Q00532 357 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 CCDC153Q494R4 210 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 EFL1Q7Z2Z2 1120 aaKnown RBP22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 ZNF438Q7Z4V0 828 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 OR4E2Q8NGC2 313 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 TCP10LQ8TDR4 215 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 NAT6Q93015 286 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 IL17FQ96PD4 163 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 DLL3Q9NYJ7 618 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 NUDT4Q9NZJ9 180 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 SPATA7Q9P0W8 599 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 LNPEPQ9UIQ6 1025 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 PLLPQ9Y342 182 aa22.91■■□□□ 1.26
TSPAN4-203ENST00000397397 DCHS1Q96JQ0 3298 aa22.9■■□□□ 1.26
TSPAN4-203ENST00000397397 LILRA5A6NI73 299 aa22.9■■□□□ 1.26
TSPAN4-203ENST00000397397 PLIN3O60664 434 aa22.9■■□□□ 1.26
TSPAN4-203ENST00000397397 CBFA2T3O75081 653 aa22.9■■□□□ 1.26
TSPAN4-203ENST00000397397 ANXA5P08758 320 aa22.9■■□□□ 1.26
TSPAN4-203ENST00000397397 CKMT2P17540 419 aa22.9■■□□□ 1.26
TSPAN4-203ENST00000397397 PKLRP30613 574 aa22.9■■□□□ 1.26
TSPAN4-203ENST00000397397 SHMT2P34897 504 aa22.9■■□□□ 1.26
TSPAN4-203ENST00000397397 CCDC63Q8NA47 563 aa22.9■■□□□ 1.26
TSPAN4-203ENST00000397397 CDC6Q99741 560 aa22.9■■□□□ 1.26
TSPAN4-203ENST00000397397 RAB11FIP5Q9BXF6 653 aa22.9■■□□□ 1.26
TSPAN4-203ENST00000397397 SRMSQ9H3Y6 488 aa22.9■■□□□ 1.26
TSPAN4-203ENST00000397397 SLC17A7Q9P2U7 560 aa22.9■■□□□ 1.26
TSPAN4-203ENST00000397397 SLC16A8O95907 504 aa22.89■■□□□ 1.25
TSPAN4-203ENST00000397397 PROCP04070 461 aa22.89■■□□□ 1.25
TSPAN4-203ENST00000397397 PNLIPP16233 465 aa22.89■■□□□ 1.25
TSPAN4-203ENST00000397397 ALDH4A1P30038 563 aa22.89■■□□□ 1.25
TSPAN4-203ENST00000397397 RPA3P35244 121 aaPredicted RBP22.89■■□□□ 1.25
TSPAN4-203ENST00000397397 GPR3P46089 330 aa22.89■■□□□ 1.25
TSPAN4-203ENST00000397397 RAB28P51157 221 aa22.89■■□□□ 1.25
TSPAN4-203ENST00000397397 PERM1Q5SV97 790 aa22.89■■□□□ 1.25
TSPAN4-203ENST00000397397 PIP4P1Q86T03 277 aa22.89■■□□□ 1.25
TSPAN4-203ENST00000397397 AMIGO1Q86WK6 493 aa22.89■■□□□ 1.25
TSPAN4-203ENST00000397397 TMEM151AQ8N4L1 468 aa22.89■■□□□ 1.25
TSPAN4-203ENST00000397397 Q8N9G6 341 aaPredicted RBP22.89■■□□□ 1.25
TSPAN4-203ENST00000397397 LMNTD1Q8N9Z9 388 aa22.89■■□□□ 1.25
TSPAN4-203ENST00000397397 BAHD1Q8TBE0 780 aaPredicted RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms