RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 OAZ2O95190 189 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 IFNA21P01568 189 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 ZNF35P13682 527 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 POU2F1P14859 743 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 NR1H2P55055 460 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 ADARP55265 1226 aaKnown RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 OR12D2P58182 307 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 RPS15P62841 145 aaKnown RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 RPS24P62847 133 aaKnown RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 EIF5AP63241 154 aaKnown RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 LIPEQ05469 1076 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 GRIK2Q13002 908 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 E2F2Q14209 437 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 EIF2S3LQ2VIR3 472 aaKnown RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 ITPRIPL2Q3MIP1 535 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 SLC25A25Q6KCM7 469 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 ZNF613Q6PF04 617 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 ARL10Q8N8L6 244 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 ZNF548Q8NEK5 533 aaPredicted RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 SPATA22Q8NHS9 363 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 PHOSPHO1Q8TCT1 267 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 NXNL1Q96CM4 212 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 C8orf48Q96LL4 319 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 ZFP3Q96NJ6 502 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 HNRNPABQ99729 332 aaKnown RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 HSD17B14Q9BPX1 270 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 GORASP1Q9BQQ3 440 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 DEFB126Q9BYW3 111 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 PNPLA3Q9NST1 481 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 PRPF19Q9UMS4 504 aaKnown RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 MAN2B2Q9Y2E5 1009 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 TESMINQ9Y4I5 508 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 BACE2Q9Y5Z0 518 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 A0A1W2PRB8 838 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 A0A1W2PRQ8 180 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 NRP1O14786 923 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 ARPC2O15144 300 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 TSPAN1O60635 241 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 COQ9O75208 318 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 CILPO75339 1184 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 KDM4BO94953 1096 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 OR4F21O95013 312 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 HEXBP07686 556 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 CSKP41240 450 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 GLP1RP43220 463 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 EIF1AXP47813 144 aaKnown RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 XIAPP98170 497 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 ITGB3BPQ13352 177 aaPredicted RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 MADCAM1Q13477 382 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 IFI44LQ53G44 452 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 TXNDC8Q6A555 127 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 NOXRED1Q6NXP6 359 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 BEND4Q6ZU67 534 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 GRASPQ7Z6J2 395 aaPredicted RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 HAS1Q92839 578 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 NXPE2Q96DL1 559 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 PSKH2Q96QS6 385 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 RIOK2Q9BVS4 552 aaKnown RBP7.06□□□□□ -1.28
UPF2-203ENST00000397053 OSBPL11Q9BXB4 747 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 ASPNQ9BXN1 380 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 GDF3Q9NR23 364 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 C1orf109Q9NX04 203 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 STXBP5LQ9Y2K9 1186 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 FADS3Q9Y5Q0 445 aa7.06□□□□□ -1.28
UPF2-203ENST00000397053 EDDM13A0A1B0GTR0 161 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 TCRBV5S4A2TA0A5A2 114 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 SH3D21A4FU49 640 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 C5orf51A6NDU8 294 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 PITPNM1O00562 1244 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 ABHD2P08910 425 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 GP1BBP13224 206 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 TAS2R40P59535 323 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 ZNF234Q14588 700 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 NOMO1Q15155 1222 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 GPR33Q49SQ1 333 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 PRAMEF14Q5SWL7 426 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 ADGRF1Q5T601 910 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 PRAMEF13Q5VWM6 474 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 UNQ6126/PRO20091Q6UXV3 157 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 USP30Q70CQ3 517 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 VASH1Q7L8A9 365 aaPredicted RBP7.05□□□□□ -1.28
UPF2-203ENST00000397053 OR4E2Q8NGC2 313 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 ZNF570Q96NI8 536 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 NPAS2Q99743 824 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 ELAC1Q9H777 363 aaKnown RBP7.05□□□□□ -1.28
UPF2-203ENST00000397053 L2HGDHQ9H9P8 463 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 PNPOQ9NVS9 261 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 LYARQ9NX58 379 aaKnown RBP7.05□□□□□ -1.28
UPF2-203ENST00000397053 RDH8Q9NYR8 311 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 TVP23BQ9NYZ1 205 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 IL36AQ9UHA7 158 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 PFDN2Q9UHV9 154 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 CORO1CQ9ULV4 474 aaPredicted RBP7.05□□□□□ -1.28
UPF2-203ENST00000397053 KCNK6Q9Y257 313 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 WBP11Q9Y2W2 641 aaKnown RBP7.05□□□□□ -1.28
UPF2-203ENST00000397053 FKBP7Q9Y680 259 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 WNT6Q9Y6F9 365 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 DGKBQ9Y6T7 804 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 ASTN1O14525 1302 aa7.05□□□□□ -1.28
UPF2-203ENST00000397053 E2F3O00716 465 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms