RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 CACNG1Q06432 222 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 TLR1Q15399 786 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 ANKRD20A2Q5SQ80 823 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 ANKRD20A1Q5TYW2 823 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 ANKRD20A3Q5VUR7 823 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 OVCH1Q7RTY7 1134 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 DNAJC22Q8N4W6 341 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 ZNF655Q8N720 491 aaPredicted RBP16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 OR5K2Q8NHB8 316 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 DNAJB14Q8TBM8 379 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 NAT14Q8WUY8 206 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 FAR1Q8WVX9 515 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 CHP1Q99653 195 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 SLC26A1Q9H2B4 701 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 FAM96AQ9H5X1 160 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 EPS8L2Q9H6S3 715 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 NLE1Q9NVX2 485 aaPredicted RBP16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 DHCR7Q9UBM7 475 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 NOVA2Q9UNW9 492 aaKnown RBP16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 CDYLQ9Y232 598 aa16.86■□□□□ 0.29
EXOSC3-202ENST00000396521 A0A1B0GX78 115 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 SYCE3A1L190 88 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 LRRTM2O43300 516 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 CTNNA2P26232 953 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 ACADLP28330 430 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 TMPRSS15P98073 1019 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 ITIH4Q14624 930 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 ZRSR2Q15696 482 aaKnown RBP16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 ZIC1Q15915 447 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 DENND5AQ6IQ26 1287 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 TAS2R42Q7RTR8 314 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 CLDN19Q8N6F1 224 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 CALR3Q96L12 384 aaKnown RBP16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 SPATA13Q96N96 652 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 ALS2CR12Q96Q35 445 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 TBL1YQ9BQ87 522 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 APOL2Q9BQE5 337 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 GORASP1Q9BQQ3 440 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 ENAMQ9NRM1 1142 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 INTS7Q9NVH2 962 aaKnown RBP16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 EURLQ9NYK6 297 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 FBXL4Q9UKA2 621 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 NTNG1Q9Y2I2 539 aa16.85■□□□□ 0.29
EXOSC3-202ENST00000396521 FKBP9O95302 570 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 ALAS2P22557 587 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 PSMB4P28070 264 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 CETN2P41208 172 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 ZNF169Q14929 603 aaPredicted RBP16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 ZC3H12BQ5HYM0 836 aaKnown RBP16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 TCTE1Q5JU00 501 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 RPUSD3Q6P087 351 aaKnown RBP16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 CNGA4Q8IV77 575 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 KLHDC8BQ8IXV7 354 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 OR5AR1Q8NGP9 310 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 FLVCR1-AS1Q8TAF5 88 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 STYXQ8WUJ0 223 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 MARVELD3Q96A59 401 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 LMF1Q96S06 567 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 TTC1Q99614 292 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 LHPPQ9H008 270 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 SEMA3GQ9NS98 782 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 SMARCAL1Q9NZC9 954 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 CDC23Q9UJX2 597 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 CNTRLQ7Z7A1 2325 aa16.84■□□□□ 0.29
EXOSC3-202ENST00000396521 ISM1B1AKI9 464 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 MFAP3LO75121 409 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 CNOT3O75175 753 aaKnown RBP16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 RPN2P04844 631 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 STSP08842 583 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 OR56A5P0C7T3 313 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 RBP3P10745 1247 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 CDC16Q13042 620 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 SKOR2Q2VWA4 1001 aaPredicted RBP16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 DEFB110Q30KQ9 67 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 DNAJC21Q5F1R6 531 aaKnown RBP16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 C11orf63Q6NUN7 778 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 PACS1Q6VY07 963 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 TRIM73Q86UV7 250 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 ACTL9Q8TC94 416 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 GRHL3Q8TE85 626 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 ELMO1Q92556 727 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 CDKN2AIPNLQ96HQ2 116 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 DNAJC1Q96KC8 554 aaKnown RBP16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 HEMGNQ9BXL5 484 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 ZBTB20Q9HC78 741 aaPredicted RBP16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 SLC6A20Q9NP91 592 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 SPHK1Q9NYA1 384 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 OSGIN2Q9Y236 505 aa16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 TDRKHQ9Y2W6 561 aaKnown RBP16.83■□□□□ 0.28
EXOSC3-202ENST00000396521 DIDO1Q9BTC0 2240 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 SLC5A10A0PJK1 596 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 CCDC78A2IDD5 438 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 KCNN4O15554 427 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 HCRTR1O43613 425 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 PSMA3P25788 255 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 PTPN7P35236 360 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 GCGRP47871 477 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 RAB28P51157 221 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 EIF3EP60228 445 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 OTUD4Q01804 1114 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms