RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 CBSP35520 551 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 SKIV2L2P42285 1042 aaKnown RBP19.29■□□□□ 0.68
SNCA-203ENST00000394986 RAB28P51157 221 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 TTC23LQ6PF05 361 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 TMEM207Q6UWW9 146 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 TRIM73Q86UV7 250 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 CEP97Q8IW35 865 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 DENND1AQ8TEH3 1009 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 ANKZF1Q9H8Y5 726 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 ASCL3Q9NQ33 180 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 AKAP7Q9P0M2 348 aaPredicted RBP19.29■□□□□ 0.68
SNCA-203ENST00000394986 ADAMTS6Q9UKP5 1117 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 SLC39A10Q9ULF5 831 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 PCDHGA8Q9Y5G5 932 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 WDFY3Q8IZQ1 3526 aa19.29■□□□□ 0.68
SNCA-203ENST00000394986 KIF26BQ2KJY2 2108 aa19.28■□□□□ 0.68
SNCA-203ENST00000394986 RASGRF2O14827 1237 aa19.28■□□□□ 0.68
SNCA-203ENST00000394986 PHBP35232 272 aa19.28■□□□□ 0.68
SNCA-203ENST00000394986 CCNFP41002 786 aa19.28■□□□□ 0.68
SNCA-203ENST00000394986 RGS4P49798 205 aa19.28■□□□□ 0.68
SNCA-203ENST00000394986 ASB11Q8WXH4 323 aa19.28■□□□□ 0.68
SNCA-203ENST00000394986 ZCCHC14Q8WYQ9 949 aaKnown RBP19.28■□□□□ 0.68
SNCA-203ENST00000394986 RAD51AP1Q96B01 352 aa19.28■□□□□ 0.68
SNCA-203ENST00000394986 SLC46A1Q96NT5 459 aa19.28■□□□□ 0.68
SNCA-203ENST00000394986 KLHL25Q9H0H3 589 aa19.28■□□□□ 0.68
SNCA-203ENST00000394986 ZNF768Q9H5H4 540 aaKnown RBP19.28■□□□□ 0.68
SNCA-203ENST00000394986 OR6C2Q9NZP2 312 aa19.28■□□□□ 0.68
SNCA-203ENST00000394986 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.28■□□□□ 0.68
SNCA-203ENST00000394986 V9GYY5 206 aaPredicted RBP19.28■□□□□ 0.68
SNCA-203ENST00000394986 FREM2Q5SZK8 3169 aa19.28■□□□□ 0.68
SNCA-203ENST00000394986 PIPSLA2A3N6 862 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 TLCD2A6NGC4 264 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 C2orf74A8MZ97 194 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 KDM1AO60341 852 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 CATP04040 527 aaKnown RBP19.27■□□□□ 0.68
SNCA-203ENST00000394986 PVRP15151 417 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 UGT2B7P16662 529 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 RBMS1P29558 406 aaKnown RBP19.27■□□□□ 0.68
SNCA-203ENST00000394986 PRDX3P30048 256 aaKnown RBP19.27■□□□□ 0.68
SNCA-203ENST00000394986 SH3BP2P78314 561 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 NAB1Q13506 487 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 SLMAPQ14BN4 828 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 UBE2R2Q712K3 238 aaPredicted RBP19.27■□□□□ 0.68
SNCA-203ENST00000394986 RASGRP3Q8IV61 690 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 FAM20CQ8IXL6 584 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 MYO1HQ8N1T3 1032 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 BMPERQ8N8U9 685 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 FLVCR1-AS1Q8TAF5 88 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 KLHL6Q8WZ60 621 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 DLG3Q92796 817 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 CD180Q99467 661 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 GPR22Q99680 433 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 ACSS3Q9H6R3 686 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 IKZF3Q9UKT9 509 aa19.27■□□□□ 0.68
SNCA-203ENST00000394986 ACACBO00763 2458 aa19.27■□□□□ 0.67
SNCA-203ENST00000394986 GFYI3L273 518 aa19.26■□□□□ 0.67
SNCA-203ENST00000394986 EIF3FO00303 357 aaPredicted RBP19.26■□□□□ 0.67
SNCA-203ENST00000394986 TOX3O15405 576 aaPredicted RBP19.26■□□□□ 0.67
SNCA-203ENST00000394986 PHGDHO43175 533 aaKnown RBP19.26■□□□□ 0.67
SNCA-203ENST00000394986 DXOO77932 396 aaKnown RBP19.26■□□□□ 0.67
SNCA-203ENST00000394986 SYF2O95926 243 aaKnown RBP19.26■□□□□ 0.67
SNCA-203ENST00000394986 ITGA2BP08514 1039 aa19.26■□□□□ 0.67
SNCA-203ENST00000394986 ZNF37AP17032 561 aaPredicted RBP19.26■□□□□ 0.67
SNCA-203ENST00000394986 CDH3P22223 829 aa19.26■□□□□ 0.67
SNCA-203ENST00000394986 IL2P60568 153 aa19.26■□□□□ 0.67
SNCA-203ENST00000394986 BMPR2Q13873 1038 aa19.26■□□□□ 0.67
SNCA-203ENST00000394986 USP10Q14694 798 aaKnown RBP19.26■□□□□ 0.67
SNCA-203ENST00000394986 KCNAB1Q14722 419 aa19.26■□□□□ 0.67
SNCA-203ENST00000394986 UAP1Q16222 522 aaPredicted RBP19.26■□□□□ 0.67
SNCA-203ENST00000394986 GRTP1Q5TC63 336 aa19.26■□□□□ 0.67
SNCA-203ENST00000394986 SPESP1Q6UW49 350 aa19.26■□□□□ 0.67
SNCA-203ENST00000394986 OR2L8Q8NGY9 312 aa19.26■□□□□ 0.67
SNCA-203ENST00000394986 USP7Q93009 1102 aa19.26■□□□□ 0.67
SNCA-203ENST00000394986 OR2A14Q96R47 310 aa19.26■□□□□ 0.67
SNCA-203ENST00000394986 CYTH2Q99418 400 aa19.26■□□□□ 0.67
SNCA-203ENST00000394986 PKP4Q99569 1192 aa19.26■□□□□ 0.67
SNCA-203ENST00000394986 CTRCQ99895 268 aa19.26■□□□□ 0.67
SNCA-203ENST00000394986 SIDT1Q9NXL6 827 aaKnown RBP19.26■□□□□ 0.67
SNCA-203ENST00000394986 SEMA5BQ9P283 1151 aa19.26■□□□□ 0.67
SNCA-203ENST00000394986 SLC9B1P1A6NJY1 282 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 ISM1B1AKI9 464 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 C9orf172C9J069 976 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 MYO1CO00159 1063 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 MATN2O00339 956 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 TLX3O43711 291 aaPredicted RBP19.25■□□□□ 0.67
SNCA-203ENST00000394986 PRAMEF10O60809 474 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 ST6GAL1P15907 406 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 SPRP35270 261 aaPredicted RBP19.25■□□□□ 0.67
SNCA-203ENST00000394986 GMPRP36959 345 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 POU4F1Q01851 419 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 FASTKQ14296 549 aaKnown RBP19.25■□□□□ 0.67
SNCA-203ENST00000394986 OR9A1PQ8NGU1 263 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 MAGEC3Q8TD91 643 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 ANKRD49Q8WVL7 239 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 UBXN4Q92575 508 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 RNF31Q96EP0 1072 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 SLC41A2Q96JW4 573 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 FUT8Q9BYC5 575 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 UNKQ9C0B0 810 aaKnown RBP19.25■□□□□ 0.67
SNCA-203ENST00000394986 TWSG1Q9GZX9 223 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms