RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 BRAT1Q6PJG6 821 aa13.71□□□□□ -0.22
PPP3CA-202ENST00000394853 MILR1Q7Z6M3 343 aa13.71□□□□□ -0.22
PPP3CA-202ENST00000394853 RAVER1Q8IY67 606 aaKnown RBP13.71□□□□□ -0.22
PPP3CA-202ENST00000394853 MRGPRX3Q96LB0 322 aa13.71□□□□□ -0.22
PPP3CA-202ENST00000394853 NR1H4Q96RI1 486 aaPredicted RBP13.71□□□□□ -0.22
PPP3CA-202ENST00000394853 SLC25A23Q9BV35 468 aa13.71□□□□□ -0.22
PPP3CA-202ENST00000394853 PRDM6Q9NQX0 595 aa13.71□□□□□ -0.22
PPP3CA-202ENST00000394853 ARL15Q9NXU5 204 aa13.71□□□□□ -0.22
PPP3CA-202ENST00000394853 MAN2B1O00754 1011 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 TAPBPO15533 448 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 MBTPS2O43462 519 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 PCCBP05166 539 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 UROSP10746 265 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 CAPN3P20807 821 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 HMOX2P30519 316 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 SLC7A2P52569 658 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 MAPRE2Q15555 327 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 CCDC157Q569K6 752 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 EOGTQ5NDL2 527 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 TLDC1Q6P9B6 456 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 CRTC3Q6UUV7 619 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 PHYKPLQ8IUZ5 450 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 FOXJ1Q92949 421 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 ZNF641Q96N77 438 aaPredicted RBP13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 FARSBQ9NSD9 589 aaKnown RBP13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 LRRC42Q9Y546 428 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 ANGPT2O15123 496 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 MID1O15344 667 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 KLK8O60259 260 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 FKBP6O75344 327 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 VCLP18206 1134 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 RPS3P23396 243 aaKnown RBP eCLIP13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 UFM1P61960 85 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 TTLL9Q3SXZ7 439 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 IFNEQ86WN2 208 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 FRS2Q8WU20 508 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 MCCC1Q96RQ3 725 aaPredicted RBP13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 LYSMD1Q96S90 227 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 PIF1Q9H611 641 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 SARDHQ9UL12 918 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 PRPF19Q9UMS4 504 aaKnown RBP13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 AK5Q9Y6K8 562 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 EP300Q09472 2414 aaPredicted RBP13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 RIF1Q5UIP0 2472 aaKnown RBP13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 A0A1W2PQ67 120 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 TCRBV21S2A2A0A5A6 115 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 OR7A17O14581 309 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 TIMP2P16035 220 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 PEX2P28328 305 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 NR6A1Q15406 480 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 GRAMD1BQ3KR37 738 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 DHDDSQ86SQ9 333 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 CBARPQ8N350 705 aaPredicted RBP13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 CEP44Q9C0F1 390 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 OPTCQ9UBM4 332 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 CARD8Q9Y2G2 431 aa13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 MTCL1Q9Y4B5 1905 aaKnown RBP13.7□□□□□ -0.22
PPP3CA-202ENST00000394853 OR56A5P0C7T3 313 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 IL12RB1P42701 662 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 RPIAP49247 311 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 ABRAXAS2Q15018 415 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 ZNF805Q5CZA5 627 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 TMEM31Q5JXX7 168 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 THOC7Q6I9Y2 204 aaKnown RBP13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 MACC1Q6ZN28 852 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 CEP68Q76N32 757 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 SMRP1Q8NCR6 262 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 SYNDIG1Q9H7V2 258 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 KLQ9UEF7 1012 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 CROTQ9UKG9 612 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 PRORSD1PA6NEY8 169 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 UPK3BL1B0FP48 263 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 UPK3BL2E5RIL1 263 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 FOXD2O60548 495 aaPredicted RBP13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 NEK2P51955 445 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 HMGCS1Q01581 520 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 CPSF6Q16630 551 aaKnown RBP eCLIP13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 HNRNPA1L2Q32P51 320 aaKnown RBP13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 RLN3Q8WXF3 142 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 TMEM159Q96B96 161 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 BTBD1Q9H0C5 482 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 ATG10Q9H0Y0 220 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 COPS7BQ9H9Q2 264 aaPredicted RBP13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 RNF11Q9Y3C5 154 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 GBF1Q92538 1859 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 TMEM202A6NGA9 273 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 LRRC72A6NJI9 287 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 SOBPA7XYQ1 873 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 STMND1H3BQB6 276 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 GGT5P36269 586 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 Q6ZSR9 355 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 UBE2R2Q712K3 238 aaPredicted RBP13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 LILRA3Q8N6C8 439 aaPredicted RBP13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 DNAJB14Q8TBM8 379 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 ELMO1Q92556 727 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 ULK4Q96C45 1275 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 GPSM3Q9Y4H4 160 aa13.69□□□□□ -0.22
PPP3CA-202ENST00000394853 SGTAO43765 313 aa13.68□□□□□ -0.22
PPP3CA-202ENST00000394853 IL33O95760 270 aa13.68□□□□□ -0.22
PPP3CA-202ENST00000394853 DRD1P21728 446 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms