RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 CTSCP53634 463 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 TAS2R38P59533 333 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 PHKG1Q16816 387 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 TMEM196Q5HYL7 178 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 C1orf146Q5VVC0 180 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 CLEC6AQ6EIG7 209 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 RAET1GQ6H3X3 334 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 DHRS4L2Q6PKH6 230 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 UGT2A3Q6UWM9 527 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 SBSNQ6UWP8 590 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 CYHR1Q6ZMK1 362 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 FRA10AC1Q70Z53 315 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 ZNF554Q86TJ5 538 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 VRK3Q8IV63 474 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 NRSN1Q8IZ57 195 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 RASGEF1AQ8N9B8 481 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 IL17RCQ8NAC3 791 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 RBM15BQ8NDT2 890 aaKnown RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 DDHD1Q8NEL9 900 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 DTX3LQ8TDB6 740 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 CXorf40AQ8TE69 158 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 GANCQ8TET4 914 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 DLG3Q92796 817 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 NUS1Q96E22 293 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 PANX3Q96QZ0 392 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 RBM38Q9H0Z9 239 aaKnown RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 EML4Q9HC35 981 aaKnown RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 SEMA4BQ9NPR2 832 aaPredicted RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 RAD18Q9NS91 495 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 DNAJC28Q9NX36 388 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 KCTD5Q9NXV2 234 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 SLC7A8Q9UHI5 535 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 ZNHIT2Q9UHR6 403 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 CNOT6Q9ULM6 557 aaKnown RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 G3BP2Q9UN86 482 aaKnown RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 SH3GLB1Q9Y371 365 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 GPC6Q9Y625 555 aaPredicted RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 COL4A3Q01955 1670 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 TCF20Q9UGU0 1960 aaKnown RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 KRT87PA6NCN2 255 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 TMEM221A6NGB7 291 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 H0YJX3 145 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 FFAR2O15552 330 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 MBTPS2O43462 519 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 TSPAN6O43657 245 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 NARSO43776 548 aaKnown RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 CDK14O94921 469 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 TNFAIP8O95379 198 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 KLF8O95600 359 aaPredicted RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 ZCCHC18P0CG32 403 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 AOAHP28039 575 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 PRDX6P30041 224 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 SERPINB5P36952 375 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 GATA4P43694 442 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 GPR1P46091 355 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 INHBCP55103 352 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 FOXA1P55317 472 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 RPS14P62263 151 aaKnown RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 CLCQ05315 142 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 TMEM115Q12893 351 aaPredicted RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 PDK3Q15120 406 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 TTLL9Q3SXZ7 439 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 TMEM52BQ4KMG9 183 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 LDLRAP1Q5SW96 308 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 AGBL4Q5VU57 503 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 TMEM198Q66K66 360 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 ANKS6Q68DC2 871 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 NXNQ6DKJ4 435 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 SDE2Q6IQ49 451 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 PGM2L1Q6PCE3 622 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 MBOAT1Q6ZNC8 495 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 ADAMTSL2Q86TH1 951 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 TREML1Q86YW5 311 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 RAVER1Q8IY67 606 aaKnown RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 LILRA3Q8N6C8 439 aaPredicted RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 DCBLD1Q8N8Z6 715 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 ZBTB8BQ8NAP8 495 aaPredicted RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 SMYD1Q8NB12 490 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 PLA2G15Q8NCC3 412 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 ACTRT2Q8TDY3 377 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 STON2Q8WXE9 905 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 ELMO1Q92556 727 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 KLK6Q92876 244 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 CCDC106Q9BWC9 280 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 FAM126AQ9BYI3 521 aaPredicted RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 UBE2ZQ9H832 354 aaPredicted RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 MID1IP1Q9NPA3 183 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 TCF7L2Q9NQB0 619 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 FBXL12Q9NXK8 326 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 NFKBIL1Q9UBC1 381 aaPredicted RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 BCAP29Q9UHQ4 241 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 EIF2B4Q9UI10 523 aaKnown RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 PAIP2BQ9ULR5 123 aaKnown RBP6.79□□□□□ -1.32
RTN4-205ENST00000394609 TRAF6Q9Y4K3 522 aa6.79□□□□□ -1.32
RTN4-205ENST00000394609 ATG2BQ96BY7 2078 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 TRIOO75962 3097 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 TMEM265A0A087WTH1 108 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 A0A0J9YVX5 310 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 A0A1W2PQF6 199 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 PRR5-ARHGAP8B1AHC4 643 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms