RNA–Protein interactions for RNA: ENST00000394303.7

CACNB1-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNB1, Length 3,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-202ENST00000394303 C3orf30Q96M34 536 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 TCF25Q9BQ70 676 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 TUBA1CQ9BQE3 449 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 FEM1AQ9BSK4 669 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 NANOGQ9H9S0 305 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 IMP3Q9NV31 184 aaKnown RBP12.96□□□□□ -0.33
CACNB1-202ENST00000394303 ARPC2O15144 300 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 PABPC1P11940 636 aaKnown RBP12.96□□□□□ -0.33
CACNB1-202ENST00000394303 S100A1P23297 94 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 POLR2IP36954 125 aaKnown RBP12.96□□□□□ -0.33
CACNB1-202ENST00000394303 MEF2AQ02078 507 aaPredicted RBP12.96□□□□□ -0.33
CACNB1-202ENST00000394303 TAF1AQ15573 450 aaPredicted RBP12.96□□□□□ -0.33
CACNB1-202ENST00000394303 PM20D1Q6GTS8 502 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 CYP20A1Q6UW02 462 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 CHST9Q7L1S5 443 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 BTLAQ7Z6A9 289 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 COLGALT2Q8IYK4 626 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 APCDD1Q8J025 514 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 STX19Q8N4C7 294 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 ZUFSPQ96AP4 578 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 NDEL1Q9GZM8 345 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 SYNDIG1Q9H7V2 258 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 REEP1Q9H902 201 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 SGK2Q9HBY8 427 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 OGDHLQ9ULD0 1010 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 MAP4K5Q9Y4K4 846 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 WDR81Q562E7 1941 aa12.96□□□□□ -0.33
CACNB1-202ENST00000394303 IFRD1O00458 451 aaPredicted RBP12.96□□□□□ -0.34
CACNB1-202ENST00000394303 MUSKO15146 869 aa12.96□□□□□ -0.34
CACNB1-202ENST00000394303 SMAD6O43541 496 aaKnown RBP12.96□□□□□ -0.34
CACNB1-202ENST00000394303 IDUAP35475 653 aa12.96□□□□□ -0.34
CACNB1-202ENST00000394303 KCNC1P48547 511 aa12.96□□□□□ -0.34
CACNB1-202ENST00000394303 PIGFQ07326 219 aa12.96□□□□□ -0.34
CACNB1-202ENST00000394303 TNK2Q07912 1038 aa12.96□□□□□ -0.34
CACNB1-202ENST00000394303 DNASE1L3Q13609 305 aa12.96□□□□□ -0.34
CACNB1-202ENST00000394303 RAVER1Q8IY67 606 aaKnown RBP12.96□□□□□ -0.34
CACNB1-202ENST00000394303 KREMEN2Q8NCW0 462 aa12.96□□□□□ -0.34
CACNB1-202ENST00000394303 ZNF540Q8NDQ6 660 aa12.96□□□□□ -0.34
CACNB1-202ENST00000394303 ABHD11Q8NFV4 315 aa12.96□□□□□ -0.34
CACNB1-202ENST00000394303 ZFYVE19Q96K21 471 aa12.96□□□□□ -0.34
CACNB1-202ENST00000394303 ALPK1Q96QP1 1244 aa12.96□□□□□ -0.34
CACNB1-202ENST00000394303 TSPAN18Q96SJ8 248 aa12.96□□□□□ -0.34
CACNB1-202ENST00000394303 TPK1Q9H3S4 243 aa12.96□□□□□ -0.34
CACNB1-202ENST00000394303 CREBZFQ9NS37 354 aa12.96□□□□□ -0.34
CACNB1-202ENST00000394303 SHROOM3Q8TF72 1996 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 G3V2T6 193 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 TPD52L2O43399 206 aaKnown RBP12.95□□□□□ -0.34
CACNB1-202ENST00000394303 VPS4BO75351 444 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 TRBC1P01850 177 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 MAPK1P28482 360 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 TRPC1P48995 793 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 ZC3H12BQ5HYM0 836 aaKnown RBP12.95□□□□□ -0.34
CACNB1-202ENST00000394303 ZNF549Q6P9A3 640 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 PIWIL3Q7Z3Z3 882 aaKnown RBP12.95□□□□□ -0.34
CACNB1-202ENST00000394303 KRTCAP2Q8N6L1 136 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 OR5AK3PQ8NH89 298 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 ZNF461Q8TAF7 563 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 ROPN1LQ96C74 230 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 ZNF347Q96SE7 839 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 HOPXQ9BPY8 73 aaPredicted RBP12.95□□□□□ -0.34
CACNB1-202ENST00000394303 LHPPQ9H008 270 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 TMEM248Q9NWD8 314 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 GMPPBQ9Y5P6 360 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 ESR1P03372 595 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 CSF2RAP15509 400 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 IFNA8P32881 189 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 HPCAL1P37235 193 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 PTGER3P43115 390 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 KIR3DL1P43629 444 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 MLLT10P55197 1068 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 GRSF1Q12849 480 aaKnown RBP eCLIP12.95□□□□□ -0.34
CACNB1-202ENST00000394303 PCBP2Q15366 365 aaKnown RBP eCLIP12.95□□□□□ -0.342e-7■■■■■ 30.9
CACNB1-202ENST00000394303 SF1Q15637 639 aaKnown RBP12.95□□□□□ -0.34
CACNB1-202ENST00000394303 KCNJ8Q15842 424 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 CYBRD1Q53TN4 286 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 ARSIQ5FYB1 569 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 ALKAL1Q6UXT8 129 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 CADM3Q8N126 398 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 TRPV3Q8NET8 790 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 VANGL1Q8TAA9 524 aaPredicted RBP12.95□□□□□ -0.34
CACNB1-202ENST00000394303 STON2Q8WXE9 905 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 C8orf48Q96LL4 319 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 MUS81Q96NY9 551 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 TSGA13Q96PP4 275 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 TDRD1Q9BXT4 1180 aaKnown RBP12.95□□□□□ -0.34
CACNB1-202ENST00000394303 MEAF6Q9HAF1 191 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 KCNE2Q9Y6J6 123 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 MICAL3Q7RTP6 2002 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 PRKD3O94806 890 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 DBTP11182 482 aaKnown RBP12.95□□□□□ -0.34
CACNB1-202ENST00000394303 PTNP21246 168 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 SCAPQ12770 1279 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 BNIP2Q12982 314 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 MAD2L1Q13257 205 aaPredicted RBP12.95□□□□□ -0.34
CACNB1-202ENST00000394303 DEPDC1Q5TB30 811 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 LRRC66Q68CR7 880 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 OR4F3Q6IEY1 312 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 TMEM220Q6QAJ8 160 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 SUSD1Q6UWL2 747 aa12.95□□□□□ -0.34
CACNB1-202ENST00000394303 RETREG3Q86VR2 466 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms