RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 UBL4BQ8N7F7 174 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 SLC35B2Q8TB61 432 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 TM9SF4Q92544 642 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 PEX13Q92968 403 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 BARD1Q99728 777 aaKnown RBP16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 SPRTNQ9H040 489 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 SPHK1Q9NYA1 384 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 IFT80Q9P2H3 777 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 NDOR1Q9UHB4 597 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 PLCL2Q9UPR0 1127 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 PRSS21Q9Y6M0 314 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 HIVEP3Q5T1R4 2406 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 NOTCH2Q04721 2471 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 DOPEY1Q5JWR5 2465 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 GRID2IPA4D2P6 1211 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 HCRTR1O43613 425 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 STIP1P31948 543 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 GCGRP47871 477 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 PLEKHN1Q494U1 663 aaPredicted RBP16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 NKAIN1Q4KMZ8 207 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 PRR30Q53SZ7 412 aaPredicted RBP16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 SYCE1Q8N0S2 351 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 GALNT16Q8N428 558 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 SLC22A18Q96BI1 424 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 SNRNP40Q96DI7 357 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 NDC1Q9BTX1 674 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 MFRPQ9BY79 579 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 LACRTQ9GZZ8 138 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 ZNF552Q9H707 407 aaPredicted RBP16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 TXLNGQ9NUQ3 528 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 P4HTMQ9NXG6 502 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 AMFRQ9UKV5 643 aa16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 REXO2Q9Y3B8 237 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 PTRH2Q9Y3E5 179 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-202ENST00000394082 CCDC78A2IDD5 438 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 HEATR9A2RTY3 570 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 SOWAHDA6NJG2 315 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 SUN1O94901 812 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 CBX6O95503 412 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 GAS8O95995 478 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 ALBP02768 609 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 RAB28P51157 221 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 ARSFP54793 590 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 ACVR1Q04771 509 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 CDH17Q12864 832 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 SYTL3Q4VX76 610 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 CRB2Q5IJ48 1285 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 PEX26Q7Z412 305 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 TRIM73Q86UV7 250 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 SLC22A15Q8IZD6 547 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 OR13J1Q8NGT2 312 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 DLG3Q92796 817 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 FKBP10Q96AY3 582 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 RANBP9Q96S59 729 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 PCM1Q15154 2024 aa16.84■□□□□ 0.29
SNRPA1-202ENST00000394082 CCDC162PA2VCL2 907 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 AGPSO00116 658 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 FKBP9O95302 570 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 RPN2P04844 631 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 PTMAP06454 111 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 PPARGP37231 505 aaPredicted RBP16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 GDF10P55107 478 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 MRPL49Q13405 166 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 KYNUQ16719 465 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 EIF2S3LQ2VIR3 472 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 DEFB110Q30KQ9 67 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 C1orf189Q5VU69 101 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 YOD1Q5VVQ6 348 aaPredicted RBP16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 ANKRD12Q6UB98 2062 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 AFTPHQ6ULP2 937 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 Q6ZS92 163 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 NLRP9Q7RTR0 991 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 PPP1R32Q7Z5V6 425 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 ZNF655Q8N720 491 aaPredicted RBP16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 COG1Q8WTW3 980 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 UBE2Q2Q8WVN8 375 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 ASZ1Q8WWH4 475 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 MRFAP1L1Q96HT8 127 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 TMEM121Q9BTD3 319 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 MENTQ9BUN1 341 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 TSSK1BQ9BXA7 367 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 FRMD8P1Q9BZ68 369 aaPredicted RBP16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 SLC26A1Q9H2B4 701 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 WDR54Q9H977 334 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 ATP13A2Q9NQ11 1180 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 EURLQ9NYK6 297 aa16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 DHCR7Q9UBM7 475 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 TDRKHQ9Y2W6 561 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-202ENST00000394082 ISM1B1AKI9 464 aa16.82■□□□□ 0.28
SNRPA1-202ENST00000394082 CNOT3O75175 753 aaKnown RBP16.82■□□□□ 0.28
SNRPA1-202ENST00000394082 GPC4O75487 556 aa16.82■□□□□ 0.28
SNRPA1-202ENST00000394082 S1PR4O95977 384 aa16.82■□□□□ 0.28
SNRPA1-202ENST00000394082 UMODP07911 640 aa16.82■□□□□ 0.28
SNRPA1-202ENST00000394082 PIM1P11309 404 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-202ENST00000394082 MMP11P24347 488 aa16.82■□□□□ 0.28
SNRPA1-202ENST00000394082 PEBP1P30086 187 aaKnown RBP16.82■□□□□ 0.28
SNRPA1-202ENST00000394082 PKLRP30613 574 aa16.82■□□□□ 0.28
SNRPA1-202ENST00000394082 AIMP2Q13155 320 aaKnown RBP16.82■□□□□ 0.28
SNRPA1-202ENST00000394082 UNC5DQ6UXZ4 953 aa16.82■□□□□ 0.28
SNRPA1-202ENST00000394082 TXLNBQ8N3L3 684 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms