RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 HMBOX1Q6NT76 420 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 MRGPRX2Q96LB1 330 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 KLHL5Q96PQ7 755 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 BRINP2Q9C0B6 783 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 TMPRSS4Q9NRS4 437 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 DNAJC11Q9NVH1 559 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 DUS2Q9NX74 493 aaKnown RBP8.44□□□□□ -1.06
GABRA1-202ENST00000393943 TAS2R9Q9NYW1 312 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 RAB23Q9ULC3 237 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 GPR45Q9Y5Y3 372 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 SH3D21A4FU49 640 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 FFAR2O15552 330 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 GABBR2O75899 941 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 C8GP07360 202 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 G6PDP11413 515 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 CD68P34810 354 aaPredicted RBP8.44□□□□□ -1.06
GABRA1-202ENST00000393943 SH3BP2P78314 561 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 FADDQ13158 208 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 SYT16Q17RD7 645 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 USP39Q53GS9 565 aaKnown RBP8.44□□□□□ -1.06
GABRA1-202ENST00000393943 AGAP6Q5VW22 663 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 PLEKHM3Q6ZWE6 761 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 LRRC70Q7Z2Q7 622 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 C11orf74Q86VG3 221 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 LAPTM4BQ86VI4 370 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 OR10G2Q8NGC3 310 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 HMCESQ96FZ2 354 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 AGAP4Q96P64 663 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 ZNF607Q96SK3 696 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 ABCA3Q99758 1704 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 CTRCQ99895 268 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 MND1Q9BWT6 205 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 CRISPLD1Q9H336 500 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 ZNF408Q9H9D4 720 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 HEBP1Q9NRV9 189 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 TBC1D14Q9P2M4 693 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 ERVK-18Q9QC07 812 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 SPEF1Q9Y4P9 236 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 SHANK3Q9BYB0 1731 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 IFNW1P05000 195 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 TRAPPC2P0DI81 140 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 TRAPPC2BP0DI82 140 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 CBSLP0DN79 551 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 MATN1P21941 496 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 PAICSP22234 425 aaKnown RBP8.44□□□□□ -1.06
GABRA1-202ENST00000393943 CBSP35520 551 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 CLCN4P51793 760 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 MLLT6P55198 1093 aaPredicted RBP8.44□□□□□ -1.06
GABRA1-202ENST00000393943 CYP4F2P78329 520 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 CPSF6Q16630 551 aaKnown RBP eCLIP8.44□□□□□ -1.06
GABRA1-202ENST00000393943 DUOXA1Q1HG43 343 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 SLX4IPQ5VYV7 408 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 DOK6Q6PKX4 331 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 RNF111Q6ZNA4 994 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 LDB1Q86U70 411 aaPredicted RBP8.44□□□□□ -1.06
GABRA1-202ENST00000393943 ZSWIM9Q86XI8 627 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 SIX5Q8N196 739 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 UMODL1-AS1Q8N2C9 162 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 LRRC20Q8TCA0 184 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 CLP1Q92989 425 aaKnown RBP8.44□□□□□ -1.06
GABRA1-202ENST00000393943 CITED4Q96RK1 184 aa8.44□□□□□ -1.06
GABRA1-202ENST00000393943 NLE1Q9NVX2 485 aaPredicted RBP8.44□□□□□ -1.06
GABRA1-202ENST00000393943 THUMPD1Q9NXG2 353 aaKnown RBP8.44□□□□□ -1.06
GABRA1-202ENST00000393943 H7C0S8 307 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 INSIG1O15503 277 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 GUCY1B2O75343 617 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 ARIH2O95376 493 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 IFNA7P01567 189 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 TRBC1P01850 177 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 OXTRP30559 389 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 RPS3AP61247 264 aaKnown RBP8.43□□□□□ -1.06
GABRA1-202ENST00000393943 CREB5Q02930 508 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 OLIG2Q13516 323 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 ZNF284Q2VY69 593 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 MFSD14CQ5VZR4 134 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 NATD1Q8N6N6 113 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 TRPV1Q8NER1 839 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 FUBP3Q96I24 572 aaKnown RBP eCLIP8.43□□□□□ -1.06
GABRA1-202ENST00000393943 TSSK3Q96PN8 268 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 TMEM248Q9NWD8 314 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 STUB1Q9UNE7 303 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 SLC9A8Q9Y2E8 581 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 PCDHGB5Q9Y5G0 923 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 COL24A1Q17RW2 1714 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 C1QAP02745 245 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 SERPINA4P29622 427 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 DCTP40126 519 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 EIF2DP41214 584 aaKnown RBP8.43□□□□□ -1.06
GABRA1-202ENST00000393943 ADCYAP1R1P41586 468 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 OR1G1P47890 313 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 HNMTP50135 292 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 SERINC3Q13530 473 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 CARTPTQ16568 116 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 SAPCD2Q86UD0 394 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 DENND6BQ8NEG7 585 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 ZNF675Q8TD23 568 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 KLHL6Q8WZ60 621 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 UBXN10Q96LJ8 280 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 GON7Q9BXV9 100 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 MED28Q9H204 178 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms