RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ENTPD4Q9Y227 616 aa14.8□□□□□ -0.04
CHMP3-202ENST00000393773 POLQO75417 2590 aa14.8□□□□□ -0.04
CHMP3-202ENST00000393773 H7C0S8 307 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 LRRTM2O43300 516 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 GSTM1P09488 218 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 EDN3P14138 238 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 POU3F2P20265 443 aaPredicted RBP14.79□□□□□ -0.04
CHMP3-202ENST00000393773 MMP11P24347 488 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 ITGA3P26006 1051 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 ACADLP28330 430 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 PER3P56645 1201 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 GSTM4Q03013 218 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 DBN1Q16643 649 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 SLC5A12Q1EHB4 618 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 ANKRD20A2Q5SQ80 823 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 ANKRD20A1Q5TYW2 823 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 ANKRD20A3Q5VUR7 823 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 HOOK3Q86VS8 718 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 CCDC50Q8IVM0 306 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 KLHDC8BQ8IXV7 354 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 PIANPQ8IYJ0 282 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 GRHL3Q8TE85 626 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 CCDC42Q96M95 316 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 SPSB2Q99619 263 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 SLX1AQ9BQ83 275 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 TBL1YQ9BQ87 522 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 OR6C2Q9NZP2 312 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 INTUQ9ULD6 942 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 OSGIN2Q9Y236 505 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 AAR2Q9Y312 384 aaKnown RBP14.79□□□□□ -0.04
CHMP3-202ENST00000393773 ALG6Q9Y672 507 aa14.79□□□□□ -0.04
CHMP3-202ENST00000393773 GOLGA6L19H0YKK7 550 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 H7C0C1 242 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 LIN7AO14910 233 aaPredicted RBP14.78□□□□□ -0.04
CHMP3-202ENST00000393773 HNRNPRO43390 633 aaKnown RBP14.78□□□□□ -0.04
CHMP3-202ENST00000393773 ZG16O60844 167 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 MFAP3LO75121 409 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 ELAVL4P26378 380 aaKnown RBP14.78□□□□□ -0.04
CHMP3-202ENST00000393773 ATP5OP48047 213 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 B3GNTL1Q67FW5 361 aaPredicted RBP14.78□□□□□ -0.04
CHMP3-202ENST00000393773 COX15Q7KZN9 410 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 TBC1D21Q8IYX1 336 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 OR5K2Q8NHB8 316 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 COG1Q8WTW3 980 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 KRT35Q92764 455 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 NACC2Q96BF6 587 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 ANP32EQ9BTT0 268 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 NDC1Q9BTX1 674 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 UNKQ9C0B0 810 aaKnown RBP14.78□□□□□ -0.04
CHMP3-202ENST00000393773 WDR54Q9H977 334 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 ARNT2Q9HBZ2 717 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 ZNHIT6Q9NWK9 470 aaKnown RBP14.78□□□□□ -0.04
CHMP3-202ENST00000393773 PLAGL1Q9UM63 463 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 PLCL2Q9UPR0 1127 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 ASF1AQ9Y294 204 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 HS3ST3B1Q9Y662 390 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 PRSS21Q9Y6M0 314 aa14.78□□□□□ -0.04
CHMP3-202ENST00000393773 MYO7BQ6PIF6 2116 aa14.77□□□□□ -0.04
CHMP3-202ENST00000393773 A0A1B0GX78 115 aa14.77□□□□□ -0.05
CHMP3-202ENST00000393773 ARHGAP10A1A4S6 786 aa14.77□□□□□ -0.05
CHMP3-202ENST00000393773 AP2A2O94973 939 aa14.77□□□□□ -0.05
CHMP3-202ENST00000393773 ZRANB2O95218 330 aaKnown RBP eCLIP14.77□□□□□ -0.05
CHMP3-202ENST00000393773 MAGP20916 626 aa14.77□□□□□ -0.05
CHMP3-202ENST00000393773 PKLRP30613 574 aa14.77□□□□□ -0.05
CHMP3-202ENST00000393773 OTUD4Q01804 1114 aaKnown RBP14.77□□□□□ -0.05
CHMP3-202ENST00000393773 ZNF169Q14929 603 aaPredicted RBP14.77□□□□□ -0.05
CHMP3-202ENST00000393773 ZNF449Q6P9G9 518 aa14.77□□□□□ -0.05
CHMP3-202ENST00000393773 CDKL3Q8IVW4 592 aaPredicted RBP14.77□□□□□ -0.05
CHMP3-202ENST00000393773 FAM20CQ8IXL6 584 aa14.77□□□□□ -0.05
CHMP3-202ENST00000393773 RCOR2Q8IZ40 523 aa14.77□□□□□ -0.05
CHMP3-202ENST00000393773 ACTL9Q8TC94 416 aa14.77□□□□□ -0.05
CHMP3-202ENST00000393773 FAR1Q8WVX9 515 aa14.77□□□□□ -0.05
CHMP3-202ENST00000393773 DLG3Q92796 817 aa14.77□□□□□ -0.05
CHMP3-202ENST00000393773 HEMGNQ9BXL5 484 aa14.77□□□□□ -0.05
CHMP3-202ENST00000393773 SLC26A1Q9H2B4 701 aa14.77□□□□□ -0.05
CHMP3-202ENST00000393773 NLE1Q9NVX2 485 aaPredicted RBP14.77□□□□□ -0.05
CHMP3-202ENST00000393773 EURLQ9NYK6 297 aa14.77□□□□□ -0.05
CHMP3-202ENST00000393773 FEZ2Q9UHY8 353 aaPredicted RBP14.77□□□□□ -0.05
CHMP3-202ENST00000393773 CDC23Q9UJX2 597 aa14.77□□□□□ -0.05
CHMP3-202ENST00000393773 HIVEP1P15822 2718 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 SLC5A10A0PJK1 596 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 BHMG1C9JSJ3 638 aaPredicted RBP14.76□□□□□ -0.05
CHMP3-202ENST00000393773 PJA2O43164 708 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 ONECUT2O95948 504 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 TPM3P06753 285 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 STSP08842 583 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 CDC16Q13042 620 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 SPARCL1Q14515 664 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 KIR2DS3Q14952 304 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 NKG7Q16617 165 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 AGAP7PQ5VUJ5 663 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 C11orf63Q6NUN7 778 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 KIRREL2Q6UWL6 708 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 PACS1Q6VY07 963 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 TTLL10Q6ZVT0 673 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 CCDC110Q8TBZ0 833 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 CNDP1Q96KN2 507 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 SPATA13Q96N96 652 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 AGAP4Q96P64 663 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 TRIM56Q9BRZ2 755 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms