RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 RASGRF2O14827 1237 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 PSIP1O75475 530 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 PIAS1O75925 651 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 CHRM5P08912 532 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 NELFEP18615 380 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 CDH3P22223 829 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 PKLRP30613 574 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 SLC5A2P31639 672 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 BDKRB1P46663 353 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 RAB15P59190 212 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 GRB7Q14451 532 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 PAQR3Q6TCH7 311 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 RELL1Q8IUW5 271 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 CTAGE3PQ8IX95 158 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 FBF1Q8TES7 1133 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 EEF1AKMT1Q8WVE0 214 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 ASB11Q8WXH4 323 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 CPNE1Q99829 537 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 RAB11FIP5Q9BXF6 653 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 ASPSCR1Q9BZE9 553 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 RHOJQ9H4E5 214 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 FBXO8Q9NRD0 319 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 CIDEBQ9UHD4 219 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 LNPEPQ9UIQ6 1025 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 ZMIZ1Q9ULJ6 1067 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 ACACAQ13085 2346 aa18.4■□□□□ 0.54
PDLIM7-204ENST00000393546 FAM95CA0A1B0GW59 222 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 ISM1B1AKI9 464 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 MAP3K7O43318 606 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 TLX3O43711 291 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 ZBTB14O43829 449 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 ZBTB11O95625 1053 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 SAT1P21673 171 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 FDXRP22570 491 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 MAP4P27816 1152 aaKnown RBP18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 PHBP35232 272 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 PCBP4P57723 403 aaKnown RBP18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 IL2P60568 153 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 KIR2DS3Q14952 304 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 ST3GAL2Q16842 350 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 KBTBD12Q3ZCT8 623 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 DCAF12Q5T6F0 453 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 BMPERQ8N8U9 685 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 OR9A1PQ8NGU1 263 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 OR2L8Q8NGY9 312 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 SNIP1Q8TAD8 396 aaKnown RBP18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 VPS39Q96JC1 886 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 SLC41A2Q96JW4 573 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 IL17FQ96PD4 163 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 RAXQ9Y2V3 346 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 PCDHGA3Q9Y5H0 932 aa18.39■□□□□ 0.53
PDLIM7-204ENST00000393546 URB1O60287 2271 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 APC2O95996 2303 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 ARHGEF33A8MVX0 844 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 C9orf172C9J069 976 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 GFYI3L273 518 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 POLR1CO15160 346 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 PRAMEF10O60809 474 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 GP5P40197 560 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 HSD11B2P80365 405 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 FOXM1Q08050 763 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 NAB1Q13506 487 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 CCSMST1Q4G0I0 132 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 TMTC4Q5T4D3 741 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 GRTP1Q5TC63 336 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 CYB5D1Q6P9G0 228 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 SPESP1Q6UW49 350 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 CEACAM20Q6UY09 585 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 PIWIL4Q7Z3Z4 852 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 SPNS2Q8IVW8 549 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 MYO1HQ8N1T3 1032 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 PPM1NQ8N819 430 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 LRRN4CLQ8ND94 238 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 ZNF248Q8NDW4 579 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 SLC22A18Q96BI1 424 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 PPM1MQ96MI6 270 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 TEFMQ96QE5 360 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 OLFM1Q99784 485 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 ZPBPQ9BS86 351 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 MENTQ9BUN1 341 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 DDA1Q9BW61 102 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 SIDT1Q9NXL6 827 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 SPHK1Q9NYA1 384 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 NINJ2Q9NZG7 142 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 SPATA7Q9P0W8 599 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 NFU1Q9UMS0 254 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 PCDHB11Q9Y5F2 797 aa18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 MAP1BP46821 2468 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-204ENST00000393546 SLC9B1P1A6NJY1 282 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 RRP8O43159 456 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 C1QAP02745 245 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 UGT2B7P16662 529 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 ECHS1P30084 290 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 SPRP35270 261 aaPredicted RBP18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 SLC12A2P55011 1212 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 SH3BP2P78314 561 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 SLMAPQ14BN4 828 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 ANKS6Q68DC2 871 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 FBXO38Q6PIJ6 1188 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 UBE2R2Q712K3 238 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms