RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 MAGEC1O60732 1142 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 RNASEH1O60930 286 aaKnown RBP2.77□□□□□ -1.97
TRAV40-201ENST00000390467 ZWINTO95229 277 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 SLC6A6P31641 620 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 ACSL1P33121 698 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 PAX9P55771 341 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 CDK3Q00526 305 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 NFATC2Q13469 925 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 TEX38Q6PEX7 206 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 TMPRSS11FQ6ZWK6 438 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 RTN4RL2Q86UN3 420 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 COMMD2Q86X83 199 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 ERC1Q8IUD2 1116 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 TTC39CQ8N584 583 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 PPFIBP2Q8ND30 876 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 NPEPL1Q8NDH3 523 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 OR52N5Q8NH56 324 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 MOSPD2Q8NHP6 518 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 VANGL1Q8TAA9 524 aaPredicted RBP2.77□□□□□ -1.97
TRAV40-201ENST00000390467 PHLDA1Q8WV24 401 aaPredicted RBP2.77□□□□□ -1.97
TRAV40-201ENST00000390467 SLCO2A1Q92959 643 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 WWTR1Q9GZV5 400 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 TBC1D17Q9HA65 648 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 SPHK2Q9NRA0 654 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 FGF21Q9NSA1 209 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 P4HTMQ9NXG6 502 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 WSB2Q9NYS7 404 aaPredicted RBP2.77□□□□□ -1.97
TRAV40-201ENST00000390467 GRID1Q9ULK0 1009 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 TP53TG3Q9ULZ0 132 aa2.77□□□□□ -1.97
TRAV40-201ENST00000390467 A0A1W2PR80 420 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 PTP4A3O75365 173 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 MED24O75448 989 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 DDHD2O94830 711 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 RBMS1P29558 406 aaKnown RBP2.76□□□□□ -1.97
TRAV40-201ENST00000390467 GCNT1Q02742 428 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 CALCOCO2Q13137 446 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 RIGQ13278 110 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 RAPSNQ13702 412 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 SLC25A47Q6Q0C1 308 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 TMCO3Q6UWJ1 677 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 TMEM207Q6UWW9 146 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 CEP57Q86XR8 500 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 EID3Q8N140 333 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 FBXO39Q8N4B4 442 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 LINC00612Q8N6U2 182 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 NIPA2Q8N8Q9 360 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 PAPD5Q8NDF8 572 aaKnown RBP2.76□□□□□ -1.97
TRAV40-201ENST00000390467 GTF3AQ92664 365 aaKnown RBP2.76□□□□□ -1.97
TRAV40-201ENST00000390467 ZNF486Q96H40 463 aaPredicted RBP2.76□□□□□ -1.97
TRAV40-201ENST00000390467 OLFM1Q99784 485 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 OR2B2Q9GZK3 357 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 SPATC1LQ9H0A9 340 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 KCNK15Q9H427 330 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 THEGQ9P2T0 379 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 B3GAT1Q9P2W7 334 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 SEC63Q9UGP8 760 aaKnown RBP2.76□□□□□ -1.97
TRAV40-201ENST00000390467 ZNF148Q9UQR1 794 aa2.76□□□□□ -1.97
TRAV40-201ENST00000390467 PCDH11YQ9BZA8 1340 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 ANKRD61A6NGH8 418 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 KPNA7A9QM74 516 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 IDH3BO43837 385 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 C22orf31O95567 290 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 HSPA8P11142 646 aaKnown RBP2.75□□□□□ -1.97
TRAV40-201ENST00000390467 VPREB1P12018 145 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 SLC15A1P46059 708 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 HUNKP57058 714 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 SIRPAP78324 504 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 MS4A2Q01362 244 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 ZNF415Q09FC8 603 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 LY6DQ14210 128 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 HERC3Q15034 1050 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 ELFN2Q5R3F8 820 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 GORABQ5T7V8 394 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 WLSQ5T9L3 541 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 CCDC30Q5VVM6 783 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 ADIPOR2Q86V24 386 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 CDK20Q8IZL9 346 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 Q8NBF4 154 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 OR10G8Q8NGN5 311 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 MIPOL1Q8TD10 442 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 C10orf90Q96M02 699 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 PRICKLE1Q96MT3 831 aaPredicted RBP2.75□□□□□ -1.97
TRAV40-201ENST00000390467 SOSTQ9BQB4 213 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 RAB11FIP5Q9BXF6 653 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 THAP2Q9H0W7 228 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 CPVLQ9H3G5 476 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 EIF2B3Q9NR50 452 aaKnown RBP2.75□□□□□ -1.97
TRAV40-201ENST00000390467 MAN2C1Q9NTJ4 1040 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 GRIP1Q9Y3R0 1128 aa2.75□□□□□ -1.97
TRAV40-201ENST00000390467 OR2A25A4D2G3 310 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 ANKUB1A6NFN9 424 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 PTGES3LE9PB15 166 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 F5H0A9 414 aaPredicted RBP2.74□□□□□ -1.97
TRAV40-201ENST00000390467 SEC24AO95486 1093 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 PTPN3P26045 913 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 CCR10P46092 362 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 ARSEP51690 589 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 PNLIPRP2P54317 469 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 MAZP56270 477 aaKnown RBP2.74□□□□□ -1.97
TRAV40-201ENST00000390467 HERV-K104P61576 105 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 216.2 ms