RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 C11orf16Q9NQ32 467 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 CCDC177Q9NQR7 707 aaPredicted RBP13.99□□□□□ -0.17
RTF1-201ENST00000389629 ZIM2Q9NZV7 527 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 VPS4AQ9UN37 437 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 ISPDA4D126 451 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 PIRO00625 290 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 C7P10643 843 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 EPORP19235 508 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 OGNP20774 298 aaKnown RBP13.98□□□□□ -0.17
RTF1-201ENST00000389629 GRK4P32298 578 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 MVKQ03426 396 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 CLCA4Q14CN2 919 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 TSTQ16762 297 aaKnown RBP13.98□□□□□ -0.17
RTF1-201ENST00000389629 CDKN2AIPNLQ96HQ2 116 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 IL4I1Q96RQ9 567 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 TSPAN18Q96SJ8 248 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 AGPAT4Q9NRZ5 378 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 A0A1W2PQ67 120 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 SLC25A14O95258 325 aaPredicted RBP13.98□□□□□ -0.17
RTF1-201ENST00000389629 CYP2A7P20853 494 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 ARRB2P32121 409 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 HTR7P34969 479 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 RCVRNP35243 200 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 BCL2L1Q07817 233 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 MZT2AQ6P582 158 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 HACD2Q6Y1H2 254 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 GPC2Q8N158 579 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 ATAD1Q8NBU5 361 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 MRGPRX2Q96LB1 330 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 SLC30A2Q9BRI3 323 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 SLC22A4Q9H015 551 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 TMLHEQ9NVH6 421 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 MARCH4Q9P2E8 410 aaPredicted RBP13.98□□□□□ -0.17
RTF1-201ENST00000389629 HSFX1Q9UBD0 423 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 ACOT8O14734 319 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 PER2O15055 1255 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 ITGA2P17301 1181 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 PARP15Q460N3 678 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 CES5AQ6NT32 575 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 ENPP6Q6UWR7 440 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 DEF8Q6ZN54 512 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 GPR142Q7Z601 462 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.98□□□□□ -0.17
RTF1-201ENST00000389629 NUDT4Q9NZJ9 180 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 MITFO75030 526 aaPredicted RBP13.98□□□□□ -0.17
RTF1-201ENST00000389629 CCNYL3P0C7X3 344 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 PAICSP22234 425 aaKnown RBP13.98□□□□□ -0.17
RTF1-201ENST00000389629 DPP6P42658 865 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 LEPRP48357 1165 aaKnown RBP13.98□□□□□ -0.17
RTF1-201ENST00000389629 HUNKP57058 714 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 GSTM4Q03013 218 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 SOX4Q06945 474 aaPredicted RBP13.98□□□□□ -0.17
RTF1-201ENST00000389629 USP39Q53GS9 565 aaKnown RBP13.98□□□□□ -0.17
RTF1-201ENST00000389629 SLC2A13Q96QE2 648 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 ACBD6Q9BR61 282 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 SIAEQ9HAT2 523 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 RAI2Q9Y5P3 530 aa13.98□□□□□ -0.17
RTF1-201ENST00000389629 CITO14578 2027 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 TBX18O95935 607 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 HSD17B1P14061 328 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 DCKP27707 260 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 ATP5C1P36542 298 aaKnown RBP13.97□□□□□ -0.17
RTF1-201ENST00000389629 ATP12AP54707 1039 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 PTSQ03393 145 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 LSMEM2Q8N112 164 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 CYP4Z2PQ8N1L4 340 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 POF1BQ8WVV4 589 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 AARSD1Q9BTE6 412 aaKnown RBP13.97□□□□□ -0.17
RTF1-201ENST00000389629 MED28Q9H204 178 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 IGSF5Q9NSI5 407 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 PCDHGA3Q9Y5H0 932 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 TAF10Q12962 218 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 DESI1Q6ICB0 168 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 BLOC1S3Q6QNY0 202 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 MFSD2AQ8NA29 543 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 SLC30A3Q99726 388 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 BARD1Q99728 777 aaKnown RBP13.97□□□□□ -0.17
RTF1-201ENST00000389629 C12orf4Q9NQ89 552 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 MKLN1Q9UL63 735 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 PCDHGA8Q9Y5G5 932 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 HS3ST4Q9Y661 456 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 DHFRP00374 187 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 TRBC1P01850 177 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 CLK3P49761 638 aaKnown RBP13.97□□□□□ -0.17
RTF1-201ENST00000389629 C6orf136Q5SQH8 315 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 PPP2R2DQ66LE6 453 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 POLR2J2Q9GZM3 115 aaKnown RBP13.97□□□□□ -0.17
RTF1-201ENST00000389629 TAS2R9Q9NYW1 312 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 ARL5CA6NH57 179 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 ANKDD1BA6NHY2 528 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 OPN1SWP03999 348 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 DNAJA1P31689 397 aaKnown RBP13.97□□□□□ -0.17
RTF1-201ENST00000389629 PTGR1Q14914 329 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 SNAPC1Q16533 368 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 XKR6Q5GH73 641 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 NHSL2Q5HYW2 709 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 CCDC28AQ8IWP9 274 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 ALPK1Q96QP1 1244 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 CIPCQ9C0C6 399 aa13.97□□□□□ -0.17
RTF1-201ENST00000389629 COQ3Q9NZJ6 369 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms