RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 OSGIN1Q9UJX0 560 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 FEM1BQ9UK73 627 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 ELOVL7A1L3X0 281 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 NPIPB9F8W1W9 429 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 GLRA3O75311 464 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 GPC4O75487 556 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 CDK2AP2O75956 126 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 COX7A2P14406 83 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 PIP4K2AP48426 406 aaPredicted RBP0.44□□□□□ -2.34
SNORA40-201ENST00000388090 MRPS34P82930 218 aaKnown RBP0.44□□□□□ -2.34
SNORA40-201ENST00000388090 FKBP3Q00688 224 aaKnown RBP0.44□□□□□ -2.34
SNORA40-201ENST00000388090 KHDRBS1Q07666 443 aaKnown RBP eCLIP0.44□□□□□ -2.34
SNORA40-201ENST00000388090 CAMK1Q14012 370 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 SLC9B1Q4ZJI4 515 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 C9orf129Q5T035 196 aaKnown RBP0.44□□□□□ -2.34
SNORA40-201ENST00000388090 C9orf66Q5T8R8 295 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 ANKRD45Q5TZF3 282 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 LEMD1Q68G75 181 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 C3P1Q6ZMU1 363 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 TPRG1Q6ZUI0 275 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 HIPK1Q86Z02 1210 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 C9orf43Q8TAL5 461 aaPredicted RBP0.44□□□□□ -2.34
SNORA40-201ENST00000388090 NOC3LQ8WTT2 800 aaKnown RBP0.44□□□□□ -2.34
SNORA40-201ENST00000388090 PHLDA1Q8WV24 401 aaPredicted RBP0.44□□□□□ -2.34
SNORA40-201ENST00000388090 STARD4Q96DR4 205 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 TMEM68Q96MH6 324 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 DGAT2Q96PD7 388 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 SPAG5Q96R06 1193 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 BARD1Q99728 777 aaKnown RBP0.44□□□□□ -2.34
SNORA40-201ENST00000388090 NKX3-1Q99801 234 aaPredicted RBP0.44□□□□□ -2.34
SNORA40-201ENST00000388090 REEP2Q9BRK0 252 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 OR2B2Q9GZK3 357 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 VN1R1Q9GZP7 353 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 INTS2Q9H0H0 1204 aaKnown RBP0.44□□□□□ -2.34
SNORA40-201ENST00000388090 BRF2Q9HAW0 419 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 FGF21Q9NSA1 209 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 ZNF275Q9NSD4 429 aaPredicted RBP0.44□□□□□ -2.34
SNORA40-201ENST00000388090 MTMR10Q9NXD2 777 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 P4HTMQ9NXG6 502 aa0.44□□□□□ -2.34
SNORA40-201ENST00000388090 SLC25A10Q9UBX3 287 aaPredicted RBP0.44□□□□□ -2.34
SNORA40-201ENST00000388090 IGHV3-38A0A0C4DH36 116 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 A0A1W2PQM1 296 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 GAPDHSO14556 408 aaPredicted RBP0.43□□□□□ -2.34
SNORA40-201ENST00000388090 TSPAN3O60637 253 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 NKX2-2O95096 273 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 VDRP11473 427 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 NR2C1P13056 603 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 CX3CL1P78423 397 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 DMPKQ09013 629 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 PNRC1Q12796 327 aaPredicted RBP0.43□□□□□ -2.34
SNORA40-201ENST00000388090 ITGA7Q13683 1181 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 TAB1Q15750 504 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 ZNF74Q16587 644 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 TIMM50Q3ZCQ8 353 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 GCNT6Q5T4J0 391 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 SLC22A25Q6T423 547 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 ABI3BPQ7Z7G0 1075 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 ZER1Q7Z7L7 766 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 MOGAT3Q86VF5 341 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 LRP11Q86VZ4 500 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 GALNT13Q8IUC8 556 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 TSPYL6Q8N831 410 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 PCYOX1LQ8NBM8 494 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 OR4Q3Q8NH05 313 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 RNF128Q8TEB7 428 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 NTNG2Q96CW9 530 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 PATZ1Q9HBE1 687 aaKnown RBP0.43□□□□□ -2.34
SNORA40-201ENST00000388090 EPB41L5Q9HCM4 733 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 PPANQ9NQ55 473 aaKnown RBP0.43□□□□□ -2.34
SNORA40-201ENST00000388090 VNN3Q9NY84 501 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 NPAP1Q9NZP6 1156 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 HAO1Q9UJM8 370 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 FBXW11Q9UKB1 542 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 RAB26Q9ULW5 256 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 MAU2Q9Y6X3 613 aa0.43□□□□□ -2.34
SNORA40-201ENST00000388090 IGHV3-16A0A0C4DH30 117 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 TTC36A6NLP5 189 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 LRRC53A6NM62 1247 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 DFNA5O60443 496 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 LYPD3O95274 346 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 TRUB2O95900 331 aaKnown RBP0.42□□□□□ -2.34
SNORA40-201ENST00000388090 UMPSP11172 480 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 CD1EP15812 388 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 FASP25445 335 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 LMO2P25791 158 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 PMELP40967 661 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 MAZP56270 477 aaKnown RBP0.42□□□□□ -2.34
SNORA40-201ENST00000388090 WNT4P56705 351 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 RPS3AP61247 264 aaKnown RBP0.42□□□□□ -2.34
SNORA40-201ENST00000388090 LRRC63Q05C16 580 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 CDH18Q13634 790 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 MEP1AQ16819 746 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 GRTP1Q5TC63 336 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 ADALQ6DHV7 355 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 ASPHD2Q6ICH7 369 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 CATSPER3Q86XQ3 398 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 CCAR1Q8IX12 1150 aaKnown RBP0.42□□□□□ -2.34
SNORA40-201ENST00000388090 OR52N5Q8NH56 324 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 AFAP1L1Q8TED9 768 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 ZDHHC19Q8WVZ1 309 aaPredicted RBP0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms