RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 PRAC1Q96KF2 57 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 CDRT15Q96T59 188 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 RAD9AQ99638 391 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 OLFM1Q99784 485 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 RBM4BQ9BQ04 359 aaKnown RBP2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 WNT5BQ9H1J7 359 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 CCDC68Q9H2F9 335 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 Q9N2K0 584 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 PDE7BQ9NP56 450 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 EQTNQ9NQ60 294 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 SERINC1Q9NRX5 453 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 SPHK1Q9NYA1 384 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 B3GAT1Q9P2W7 334 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 ADD3Q9UEY8 706 aaKnown RBP2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 PTRH2Q9Y3E5 179 aaKnown RBP2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 SNX8Q9Y5X2 465 aa2.01□□□□□ -2.09
RNU6-541P-201ENST00000384709 TCRBV21S2A2A0A5A6 115 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 NEMP2A6NFY4 417 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 O00370 1275 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 EXTL3O43909 919 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 SH3BP5O60239 455 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 KRT33AO76009 404 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 LINGO3P0C6S8 592 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 CLK1P49759 484 aaKnown RBP2□□□□□ -2.09
RNU6-541P-201ENST00000384709 ALDH3A2P51648 485 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 STAT2P52630 851 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 LIMK1P53667 647 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 LPAL2Q16609 132 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 CYP4A22Q5TCH4 519 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 GARNL3Q5VVW2 1013 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 PWWP2BQ6NUJ5 590 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 BHLHB9Q6PI77 547 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 METTL7BQ6UX53 244 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 TMPRSS11FQ6ZWK6 438 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 LINC00346Q8IVM7 164 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 ZNF595Q8IYB9 648 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 ZNF440Q8IYI8 595 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 AFAP1Q8N556 730 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 ZNF614Q8N883 585 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 SYT2Q8N9I0 419 aaPredicted RBP2□□□□□ -2.09
RNU6-541P-201ENST00000384709 OR5AP2Q8NGF4 316 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 OR5M8Q8NGP6 311 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 CCDC107Q8WV48 283 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 ZNRF4Q8WWF5 429 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 SLAMF9Q96A28 289 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 TMEM143Q96AN5 459 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 SPACA9Q96E40 222 aaPredicted RBP2□□□□□ -2.09
RNU6-541P-201ENST00000384709 LRRC3BQ96PB8 259 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 SDF4Q9BRK5 362 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 MCRIP2Q9BUT9 160 aaKnown RBP2□□□□□ -2.09
RNU6-541P-201ENST00000384709 CDK19Q9BWU1 502 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 TRPV4Q9HBA0 871 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 A4GALTQ9NPC4 353 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 SLC35C2Q9NQQ7 365 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2□□□□□ -2.09
RNU6-541P-201ENST00000384709 PLCXD1Q9NUJ7 323 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 OLAHQ9NV23 265 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 PRMT7Q9NVM4 692 aaPredicted RBP2□□□□□ -2.09
RNU6-541P-201ENST00000384709 TAB2Q9NYJ8 693 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 KLHL8Q9P2G9 620 aaPredicted RBP2□□□□□ -2.09
RNU6-541P-201ENST00000384709 MORF4L1Q9UBU8 362 aa2□□□□□ -2.09
RNU6-541P-201ENST00000384709 NDUFAF8A1L188 74 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 H7C423 109 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 GLRA3O75311 464 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 TRMUO75648 421 aaKnown RBP1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 IGHV2-70P01814 119 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 HSPA8P11142 646 aaKnown RBP1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 GJA1P17302 382 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 SAT1P21673 171 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 GABRA5P31644 462 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 EIF2DP41214 584 aaKnown RBP1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 TAF6P49848 677 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 PDX1P52945 283 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 CLDN15P56746 228 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 GSDMDP57764 484 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 HNRNPKP61978 463 aaKnown RBP eCLIP1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 ITGA7Q13683 1181 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 KLHL26Q53HC5 615 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 SYT14P1Q58G82 188 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 RILPL1Q5EBL4 403 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 C20orf194Q5TEA3 1177 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 CFAP161Q6P656 301 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 TRIM65Q6PJ69 517 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 FIP1L1Q6UN15 594 aaKnown RBP1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 DNAAF5Q86Y56 855 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 KIRREL3Q8IZU9 778 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 ARHGAP24Q8N264 748 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 C17orf53Q8N3J3 647 aaPredicted RBP1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 FBXO39Q8N4B4 442 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 DNAJC22Q8N4W6 341 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 MCUQ8NE86 351 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 TSPAN14Q8NG11 270 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 OR10G8Q8NGN5 311 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 OR4C3Q8NH37 302 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 CALML4Q96GE6 196 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 EGFL8Q99944 293 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 CHMP4AQ9BY43 222 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 FGFBP2Q9BYJ0 223 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 MTMR12Q9C0I1 747 aa1.99□□□□□ -2.09
RNU6-541P-201ENST00000384709 GPR88Q9GZN0 384 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms