RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 SUN1O94901 812 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 GAS8O95995 478 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 APRTP07741 180 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 GSTM1P09488 218 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 MSL3P1P0C860 447 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 CCR7P32248 378 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 FDFT1P37268 417 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 GABRA4P48169 554 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 SESN2P58004 480 aaPredicted RBP13.66□□□□□ -0.22
SHOX-202ENST00000381575 PRAMEP78395 509 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 GSTM4Q03013 218 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 HSPA14Q0VDF9 509 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 PRR30Q53SZ7 412 aaPredicted RBP13.66□□□□□ -0.22
SHOX-202ENST00000381575 MLIPQ5VWP3 458 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 TBC1D21Q8IYX1 336 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 GPR135Q8IZ08 494 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 TXLNBQ8N3L3 684 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 ZNF655Q8N720 491 aaPredicted RBP13.66□□□□□ -0.22
SHOX-202ENST00000381575 FDCSPQ8NFU4 85 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 OR4L1Q8NH43 312 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 NUDT9Q9BW91 350 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 SYTL2Q9HCH5 934 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 CASS4Q9NQ75 786 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 TSR3Q9UJK0 312 aaKnown RBP13.66□□□□□ -0.22
SHOX-202ENST00000381575 CDYLQ9Y232 598 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 ERI2A8K979 691 aaKnown RBP13.65□□□□□ -0.22
SHOX-202ENST00000381575 C9J4A7 227 aa13.65□□□□□ -0.22
SHOX-202ENST00000381575 H3BMH7 237 aa13.65□□□□□ -0.22
SHOX-202ENST00000381575 QSOX1O00391 747 aa13.65□□□□□ -0.22
SHOX-202ENST00000381575 ADRA1DP25100 572 aa13.65□□□□□ -0.22
SHOX-202ENST00000381575 CDC25BP30305 580 aa13.65□□□□□ -0.22
SHOX-202ENST00000381575 STIP1P31948 543 aaKnown RBP13.65□□□□□ -0.22
SHOX-202ENST00000381575 TERF1P54274 439 aa13.65□□□□□ -0.22
SHOX-202ENST00000381575 FASTKD1Q53R41 847 aaKnown RBP13.65□□□□□ -0.22
SHOX-202ENST00000381575 CCDC89Q8N998 374 aa13.65□□□□□ -0.22
SHOX-202ENST00000381575 LINC01555Q8NAE3 123 aa13.65□□□□□ -0.22
SHOX-202ENST00000381575 RANBP9Q96S59 729 aa13.65□□□□□ -0.22
SHOX-202ENST00000381575 CHRAC1Q9NRG0 131 aa13.65□□□□□ -0.22
SHOX-202ENST00000381575 POLG2Q9UHN1 485 aa13.65□□□□□ -0.22
SHOX-202ENST00000381575 RUVBL2Q9Y230 463 aaKnown RBP13.65□□□□□ -0.22
SHOX-202ENST00000381575 PCDHGA9Q9Y5G4 932 aaKnown RBP13.65□□□□□ -0.22
SHOX-202ENST00000381575 NOTCH2Q04721 2471 aa13.65□□□□□ -0.22
SHOX-202ENST00000381575 ZSCAN9O15535 394 aaPredicted RBP13.64□□□□□ -0.23
SHOX-202ENST00000381575 CNOT3O75175 753 aaKnown RBP13.64□□□□□ -0.23
SHOX-202ENST00000381575 MAGP20916 626 aa13.64□□□□□ -0.23
SHOX-202ENST00000381575 AGXTP21549 392 aa13.64□□□□□ -0.23
SHOX-202ENST00000381575 PKLRP30613 574 aa13.64□□□□□ -0.23
SHOX-202ENST00000381575 RPL22P35268 128 aaKnown RBP13.64□□□□□ -0.23
SHOX-202ENST00000381575 ACVR1Q04771 509 aa13.64□□□□□ -0.23
SHOX-202ENST00000381575 SIX1Q15475 284 aaPredicted RBP13.64□□□□□ -0.23
SHOX-202ENST00000381575 KYNUQ16719 465 aa13.64□□□□□ -0.23
SHOX-202ENST00000381575 LYPLAL1Q5VWZ2 237 aa13.64□□□□□ -0.23
SHOX-202ENST00000381575 SLC22A15Q8IZD6 547 aa13.64□□□□□ -0.23
SHOX-202ENST00000381575 RNF10Q8N5U6 811 aaKnown RBP13.64□□□□□ -0.23
SHOX-202ENST00000381575 PPHLN1Q8NEY8 458 aaKnown RBP13.64□□□□□ -0.23
SHOX-202ENST00000381575 CPT1CQ8TCG5 803 aa13.64□□□□□ -0.23
SHOX-202ENST00000381575 TCTN2Q96GX1 697 aa13.64□□□□□ -0.23
SHOX-202ENST00000381575 AP1M1Q9BXS5 423 aa13.64□□□□□ -0.23
SHOX-202ENST00000381575 MLXIPLQ9NP71 852 aa13.64□□□□□ -0.23
SHOX-202ENST00000381575 CATSPERZQ9NTU4 200 aa13.64□□□□□ -0.23
SHOX-202ENST00000381575 OR6C2Q9NZP2 312 aa13.64□□□□□ -0.23
SHOX-202ENST00000381575 PTRH2Q9Y3E5 179 aaKnown RBP13.64□□□□□ -0.23
SHOX-202ENST00000381575 CLEC18AA5D8T8 446 aa13.63□□□□□ -0.23
SHOX-202ENST00000381575 KLF7O75840 302 aaPredicted RBP13.63□□□□□ -0.23
SHOX-202ENST00000381575 CEACAM4O75871 244 aa13.63□□□□□ -0.23
SHOX-202ENST00000381575 GNLYP22749 145 aa13.63□□□□□ -0.23
SHOX-202ENST00000381575 CD97P48960 835 aa13.63□□□□□ -0.23
SHOX-202ENST00000381575 RPS6KA1Q15418 735 aa13.63□□□□□ -0.23
SHOX-202ENST00000381575 CES3Q6UWW8 571 aa13.63□□□□□ -0.23
SHOX-202ENST00000381575 CLEC18BQ6UXF7 455 aa13.63□□□□□ -0.23
SHOX-202ENST00000381575 MRGPREQ86SM8 312 aa13.63□□□□□ -0.23
SHOX-202ENST00000381575 ATCAYQ86WG3 371 aa13.63□□□□□ -0.23
SHOX-202ENST00000381575 CLEC18CQ8NCF0 446 aa13.63□□□□□ -0.23
SHOX-202ENST00000381575 GBP5Q96PP8 586 aa13.63□□□□□ -0.23
SHOX-202ENST00000381575 TTC1Q99614 292 aa13.63□□□□□ -0.23
SHOX-202ENST00000381575 MENTQ9BUN1 341 aa13.63□□□□□ -0.23
SHOX-202ENST00000381575 PAK5Q9P286 719 aa13.63□□□□□ -0.23
SHOX-202ENST00000381575 GPN3Q9UHW5 284 aaPredicted RBP13.63□□□□□ -0.23
SHOX-202ENST00000381575 RIMKLBQ9ULI2 386 aa13.63□□□□□ -0.23
SHOX-202ENST00000381575 KRT86O43790 486 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 GPC4O75487 556 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 HBQ1P09105 142 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 MCM3P25205 808 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 NMBRP28336 390 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 GRIA3P42263 894 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 BDKRB1P46663 353 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 KCNJ1P48048 391 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 RAB28P51157 221 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 BASP1P80723 227 aaKnown RBP13.62□□□□□ -0.23
SHOX-202ENST00000381575 GRB7Q14451 532 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 KIR2DS3Q14952 304 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 SLC5A12Q1EHB4 618 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 DNAJC21Q5F1R6 531 aaKnown RBP13.62□□□□□ -0.23
SHOX-202ENST00000381575 MEI1Q5TIA1 1274 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 PAPD7Q5XG87 772 aaKnown RBP13.62□□□□□ -0.23
SHOX-202ENST00000381575 RHBDD2Q6NTF9 364 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 RAB43Q86YS6 212 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 DNAJC22Q8N4W6 341 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 FAM26EQ8N5C1 309 aa13.62□□□□□ -0.23
SHOX-202ENST00000381575 DTWD1Q8N5C7 304 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms