RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 FBXO15Q8NCQ5 510 aaPredicted RBP18.76■□□□□ 0.59
GMDS-201ENST00000380805 TMEM159Q96B96 161 aa18.76■□□□□ 0.59
GMDS-201ENST00000380805 NUS1Q96E22 293 aa18.76■□□□□ 0.59
GMDS-201ENST00000380805 HDAC8Q9BY41 377 aa18.76■□□□□ 0.59
GMDS-201ENST00000380805 ZCCHC2Q9C0B9 1178 aaKnown RBP18.76■□□□□ 0.59
GMDS-201ENST00000380805 FARSBQ9NSD9 589 aaKnown RBP18.76■□□□□ 0.59
GMDS-201ENST00000380805 DNAJC11Q9NVH1 559 aa18.76■□□□□ 0.59
GMDS-201ENST00000380805 EIF3LQ9Y262 564 aaKnown RBP18.76■□□□□ 0.59
GMDS-201ENST00000380805 PRUNE2Q8WUY3 3088 aa18.76■□□□□ 0.59
GMDS-201ENST00000380805 CKAP5Q14008 2032 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 ARHGEF33A8MVX0 844 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 FFAR3O14843 346 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 GPR42O15529 346 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 RECQL5O94762 991 aaPredicted RBP18.75■□□□□ 0.59
GMDS-201ENST00000380805 C6P13671 934 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 ACPPP15309 386 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 IGFBP4P22692 258 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 GJA4P35212 333 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 EEFSECP57772 596 aaKnown RBP18.75■□□□□ 0.59
GMDS-201ENST00000380805 PFN3P60673 137 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 RPL38P63173 70 aaKnown RBP18.75■□□□□ 0.59
GMDS-201ENST00000380805 TIGD2Q4W5G0 525 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.75■□□□□ 0.59
GMDS-201ENST00000380805 LCN8Q6JVE9 175 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 SYCE2Q6PIF2 218 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 ERN2Q76MJ5 926 aaKnown RBP18.75■□□□□ 0.59
GMDS-201ENST00000380805 DHFR2Q86XF0 187 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 PTRH1Q86Y79 214 aaKnown RBP18.75■□□□□ 0.59
GMDS-201ENST00000380805 SFTPA1Q8IWL2 248 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 RGL4Q8IZJ4 473 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 DEFB123Q8N688 67 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 GLB1L3Q8NCI6 653 aaPredicted RBP18.75■□□□□ 0.59
GMDS-201ENST00000380805 CATSPER1Q8NEC5 780 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 ADCY4Q8NFM4 1077 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 SKA2Q8WVK7 121 aaPredicted RBP18.75■□□□□ 0.59
GMDS-201ENST00000380805 RAB7BQ96AH8 199 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 CHFRQ96EP1 664 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 LRTM1Q9HBL6 345 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 HCN2Q9UL51 889 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 SNX6Q9UNH7 406 aa18.75■□□□□ 0.59
GMDS-201ENST00000380805 AQP12BA6NM10 295 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 RSL1D1O76021 490 aaKnown RBP18.74■□□□□ 0.59
GMDS-201ENST00000380805 SLC2A4P14672 509 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 VARSP26640 1264 aaKnown RBP18.74■□□□□ 0.59
GMDS-201ENST00000380805 SLC7A1P30825 629 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 IL12RB1P42701 662 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 KLC1Q07866 573 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 ENPP2Q13822 863 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 CAPRIN1Q14444 709 aaKnown RBP18.74■□□□□ 0.59
GMDS-201ENST00000380805 SYTL3Q4VX76 610 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 SFT2D3Q587I9 215 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 AQP12AQ8IXF9 295 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 KIAA2013Q8IYS2 634 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 TMEM102Q8N9M5 508 aaPredicted RBP18.74■□□□□ 0.59
GMDS-201ENST00000380805 ATL1Q8WXF7 558 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 PPP2R3CQ969Q6 453 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 LINC00615Q96LM1 132 aaPredicted RBP18.74■□□□□ 0.59
GMDS-201ENST00000380805 CCDC138Q96M89 665 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 GUCD1Q96NT3 240 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 BTBD9Q96Q07 612 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 CDX2Q99626 313 aaPredicted RBP18.74■□□□□ 0.59
GMDS-201ENST00000380805 C1orf109Q9NX04 203 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 ACTR3BQ9P1U1 418 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 GULP1Q9UBP9 304 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 C1QTNF3-AMACRE9PGA6 284 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 PRAMEF4O60810 478 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 CATP04040 527 aaKnown RBP18.74■□□□□ 0.59
GMDS-201ENST00000380805 POU3F3P20264 500 aaPredicted RBP18.74■□□□□ 0.59
GMDS-201ENST00000380805 CCR3P51677 355 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 PRAMEF9Q5VWM5 478 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 NAIF1Q69YI7 327 aaPredicted RBP18.74■□□□□ 0.59
GMDS-201ENST00000380805 ANKRD54Q6NXT1 300 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 OR2T34Q8NGX1 318 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 OR2T3Q8NH03 318 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 SUSD6Q92537 303 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 ZNF514Q96K75 400 aaPredicted RBP18.74■□□□□ 0.59
GMDS-201ENST00000380805 LRGUKQ96M69 825 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 NR1H4Q96RI1 486 aaPredicted RBP18.74■□□□□ 0.59
GMDS-201ENST00000380805 ACPTQ9BZG2 426 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 IGFLR1Q9H665 355 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 IL1RL2Q9HB29 575 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 PRSS16Q9NQE7 514 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 LMCD1Q9NZU5 365 aa18.74■□□□□ 0.59
GMDS-201ENST00000380805 NPC1O15118 1278 aa18.73■□□□□ 0.59
GMDS-201ENST00000380805 JUPP14923 745 aa18.73■□□□□ 0.59
GMDS-201ENST00000380805 ATP6V1B2P21281 511 aa18.73■□□□□ 0.59
GMDS-201ENST00000380805 MAP4P27816 1152 aaKnown RBP18.73■□□□□ 0.59
GMDS-201ENST00000380805 CLNS1AP54105 237 aaKnown RBP18.73■□□□□ 0.59
GMDS-201ENST00000380805 YBX1P67809 324 aaKnown RBP18.73■□□□□ 0.59
GMDS-201ENST00000380805 MRPS35P82673 323 aaKnown RBP18.73■□□□□ 0.59
GMDS-201ENST00000380805 HMGCS1Q01581 520 aa18.73■□□□□ 0.59
GMDS-201ENST00000380805 E2F2Q14209 437 aa18.73■□□□□ 0.59
GMDS-201ENST00000380805 IMPG1Q17R60 797 aa18.73■□□□□ 0.59
GMDS-201ENST00000380805 USP39Q53GS9 565 aaKnown RBP18.73■□□□□ 0.59
GMDS-201ENST00000380805 LIPJQ5W064 366 aa18.73■□□□□ 0.59
GMDS-201ENST00000380805 TMEM220Q6QAJ8 160 aa18.73■□□□□ 0.59
GMDS-201ENST00000380805 XKR5Q6UX68 686 aa18.73■□□□□ 0.59
GMDS-201ENST00000380805 DLEU7Q6UYE1 221 aa18.73■□□□□ 0.59
GMDS-201ENST00000380805 SLCO4A1Q96BD0 722 aa18.73■□□□□ 0.59
GMDS-201ENST00000380805 PKP2Q99959 881 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms