RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 NAF1Q96HR8 494 aaKnown RBP8.98□□□□□ -0.97
HMGN1-202ENST00000380747 C9orf72Q96LT7 481 aa8.98□□□□□ -0.97
HMGN1-202ENST00000380747 SLC46A1Q96NT5 459 aa8.98□□□□□ -0.97
HMGN1-202ENST00000380747 BIRC8Q96P09 236 aa8.98□□□□□ -0.97
HMGN1-202ENST00000380747 CCDC68Q9H2F9 335 aa8.98□□□□□ -0.97
HMGN1-202ENST00000380747 TRIT1Q9H3H1 467 aaKnown RBP8.98□□□□□ -0.97
HMGN1-202ENST00000380747 SRMSQ9H3Y6 488 aa8.98□□□□□ -0.97
HMGN1-202ENST00000380747 XKR8Q9H6D3 395 aa8.98□□□□□ -0.97
HMGN1-202ENST00000380747 MVB12BQ9H7P6 319 aa8.98□□□□□ -0.97
HMGN1-202ENST00000380747 ASCL3Q9NQ33 180 aa8.98□□□□□ -0.97
HMGN1-202ENST00000380747 HRASLS2Q9NWW9 162 aa8.98□□□□□ -0.97
HMGN1-202ENST00000380747 OCIAD1Q9NX40 245 aa8.98□□□□□ -0.97
HMGN1-202ENST00000380747 WHRNQ9P202 907 aa8.98□□□□□ -0.97
HMGN1-202ENST00000380747 MRFAP1Q9Y605 127 aa8.98□□□□□ -0.97
HMGN1-202ENST00000380747 LRRK2Q5S007 2527 aa8.98□□□□□ -0.97
HMGN1-202ENST00000380747 MN1Q10571 1320 aaPredicted RBP8.98□□□□□ -0.97
HMGN1-202ENST00000380747 RP1P56715 2156 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 ZFC3H1O60293 1989 aaKnown RBP8.97□□□□□ -0.97
HMGN1-202ENST00000380747 GSAPA4D1B5 854 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 OR5K3A6NET4 321 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 EFCAB7A8K855 629 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 B8ZZF3 427 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 TP73O15350 636 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 KIF1CO43896 1103 aaKnown RBP8.97□□□□□ -0.97
HMGN1-202ENST00000380747 IL2RAP01589 272 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 C9P02748 559 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 POLR2CP19387 275 aaPredicted RBP8.97□□□□□ -0.97
HMGN1-202ENST00000380747 ACADLP28330 430 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 CARSP49589 748 aaKnown RBP8.97□□□□□ -0.97
HMGN1-202ENST00000380747 SEPHS1P49903 392 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 PLTPP55058 493 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 ADARP55265 1226 aaKnown RBP8.97□□□□□ -0.97
HMGN1-202ENST00000380747 PCBP4P57723 403 aaKnown RBP8.97□□□□□ -0.97
HMGN1-202ENST00000380747 TMPRSS3P57727 454 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 ERVPABLB-1P60509 514 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 PPP1CAP62136 330 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 RELBQ01201 579 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 PRKAA1Q13131 559 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 TUBB2AQ13885 445 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 FASTKD3Q14CZ7 662 aaKnown RBP8.97□□□□□ -0.97
HMGN1-202ENST00000380747 TAF1BQ53T94 588 aaPredicted RBP8.97□□□□□ -0.97
HMGN1-202ENST00000380747 DNTTIP2Q5QJE6 756 aaKnown RBP8.97□□□□□ -0.97
HMGN1-202ENST00000380747 PLEKHS1Q5SXH7 462 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 IGF2-ASQ6U949 168 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 CAPN12Q6ZSI9 719 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 ARHGAP22Q7Z5H3 698 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 ZBED8Q8IZ13 594 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 ZBTB2Q8N680 514 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 MNS1Q8NEH6 495 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 OR52E1Q8NGJ3 308 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 ART4Q93070 314 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 WDR83Q9BRX9 315 aaKnown RBP8.97□□□□□ -0.97
HMGN1-202ENST00000380747 LRRC1Q9BTT6 524 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 TUBB2BQ9BVA1 445 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 PLAC1Q9HBJ0 212 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 SAYSD1Q9NPB0 183 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 SLC39A1Q9NY26 324 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 GRHL1Q9NZI5 618 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 PDP2Q9P2J9 529 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 POLG2Q9UHN1 485 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 PLAGL1Q9UM63 463 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 CDYLQ9Y232 598 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 TEX264Q9Y6I9 313 aa8.97□□□□□ -0.97
HMGN1-202ENST00000380747 ESYT3A0FGR9 886 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 CTAGE15A4D2H0 777 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 CDRT15L2A8MXV6 281 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 E7ESA3 106 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 BTN3A1O00481 513 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 KDM1AO60341 852 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 PRAMEF10O60809 474 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 HAUS5O94927 633 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 SLCO2B1O94956 709 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 RPN2P04844 631 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 ANKRD34CP0C6C1 535 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 CTAGE8P0CG41 777 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 FGF3P11487 239 aaPredicted RBP8.96□□□□□ -0.98
HMGN1-202ENST00000380747 SLC5A2P31639 672 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 SHMT2P34897 504 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 ARL4DP49703 201 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 TRADDQ15628 312 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 TTLL9Q3SXZ7 439 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 ACSBG2Q5FVE4 666 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 BROXQ5VW32 411 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 STEAP4Q687X5 459 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 ZNF549Q6P9A3 640 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 TRMT10BQ6PF06 316 aaKnown RBP8.96□□□□□ -0.98
HMGN1-202ENST00000380747 FBXO38Q6PIJ6 1188 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 CNSTQ6PJW8 725 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 PRSS42Q7Z5A4 293 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 CLEC14AQ86T13 490 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 CTAGE6Q86UF2 777 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 AMIGO1Q86WK6 493 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 CCDC25Q86WR0 208 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 CTAGE4Q8IX94 777 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 TBC1D21Q8IYX1 336 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 SIDT2Q8NBJ9 832 aaKnown RBP8.96□□□□□ -0.98
HMGN1-202ENST00000380747 C2CD4AQ8NCU7 369 aaPredicted RBP8.96□□□□□ -0.98
HMGN1-202ENST00000380747 OR5K2Q8NHB8 316 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 PYROXD1Q8WU10 500 aa8.96□□□□□ -0.98
HMGN1-202ENST00000380747 TTC9Q92623 222 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms