RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 CAPN15O75808 1086 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 DNASE1L1P49184 302 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 CLCN4P51793 760 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 TARDBPQ13148 414 aaKnown RBP eCLIP15.73■□□□□ 0.11
COL2A1-202ENST00000380518 CRTC2Q53ET0 693 aaPredicted RBP15.73■□□□□ 0.11
COL2A1-202ENST00000380518 MBOAT1Q6ZNC8 495 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 ZC3HC1Q86WB0 502 aaKnown RBP15.73■□□□□ 0.11
COL2A1-202ENST00000380518 TBC1D17Q9HA65 648 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 ZCCHC3Q9NUD5 404 aaKnown RBP15.73■□□□□ 0.11
COL2A1-202ENST00000380518 ZIM2Q9NZV7 527 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 A0A1W2PRG6 482 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 HAS3O00219 553 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 WNT9AO14904 365 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 MTHFD1P11586 935 aaKnown RBP15.73■□□□□ 0.11
COL2A1-202ENST00000380518 CKMT2P17540 419 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 GRK6P43250 576 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 MASP1P48740 699 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 ZCCHC12Q6PEW1 402 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 DNAJB7Q7Z6W7 309 aaPredicted RBP15.73■□□□□ 0.11
COL2A1-202ENST00000380518 TTLQ8NG68 377 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 UFD1Q92890 307 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 SUSD3Q96L08 255 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 CGREF1Q99674 301 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 BCO2Q9BYV7 579 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 EBF2Q9HAK2 575 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 CDH7Q9ULB5 785 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 MATN2O00339 956 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 B3GALT2O43825 422 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 PGLSO95336 258 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 CFHP08603 1231 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 UGT1A6P19224 532 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 UGT1A1P22309 533 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 UGT1A4P22310 534 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 UGT1A3P35503 534 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 HMGCS1Q01581 520 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 FCHO2Q0JRZ9 810 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 IQCCQ4KMZ1 466 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 TNFAIP8L1Q8WVP5 186 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 TMCO6Q96DC7 493 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 B3GALT6Q96L58 329 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 OR52B2Q96RD2 323 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 A0A0X1KG70 313 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.73■□□□□ 0.11
COL2A1-202ENST00000380518 DUXAA6NLW8 204 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 NOS1APO75052 506 aaPredicted RBP15.73■□□□□ 0.11
COL2A1-202ENST00000380518 PAPSS2O95340 614 aaPredicted RBP15.73■□□□□ 0.11
COL2A1-202ENST00000380518 PRAMEF12O95522 483 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 CAMK1Q14012 370 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 OGFOD2Q6N063 350 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 OXR1Q8N573 874 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 NATD1Q8N6N6 113 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 SLC35F5Q8WV83 523 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 CANT1Q8WVQ1 401 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 TEX264Q9Y6I9 313 aa15.73■□□□□ 0.11
COL2A1-202ENST00000380518 DLX3O60479 287 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 XRCC1P18887 633 aaPredicted RBP15.72■□□□□ 0.11
COL2A1-202ENST00000380518 DNAJB1P25685 340 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 VARSP26640 1264 aaKnown RBP15.72■□□□□ 0.11
COL2A1-202ENST00000380518 MLLT6P55198 1093 aaPredicted RBP15.72■□□□□ 0.11
COL2A1-202ENST00000380518 SIRPB2Q5JXA9 342 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 ADNP2Q6IQ32 1131 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 CEP68Q76N32 757 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 NUDT13Q86X67 352 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 OR10H4Q8NGA5 316 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 OR51V1Q9H2C8 321 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 ANKRA2Q9H9E1 313 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 CCDC59Q9P031 241 aaKnown RBP15.72■□□□□ 0.11
COL2A1-202ENST00000380518 TPST2O60704 377 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 SRPRAP08240 638 aaKnown RBP15.72■□□□□ 0.11
COL2A1-202ENST00000380518 ACADLP28330 430 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 PIK3CBP42338 1070 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 SLC25A11Q02978 314 aaKnown RBP15.72■□□□□ 0.11
COL2A1-202ENST00000380518 UBAP2Q5T6F2 1119 aaKnown RBP15.72■□□□□ 0.11
COL2A1-202ENST00000380518 OLFML1Q6UWY5 402 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 OR10G2Q8NGC3 310 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 TP53INP1Q96A56 240 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 CDK15Q96Q40 435 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 SLIT2O94813 1529 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 NRP1O14786 923 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 ARPC2O15144 300 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 UBXN7O94888 489 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 CD2P06729 351 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 SLC9A4Q6AI14 798 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 SMARCD3Q6STE5 483 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 CHST4Q8NCG5 386 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 PYCR2Q96C36 320 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 ZNF317Q96PQ6 595 aaPredicted RBP15.72■□□□□ 0.11
COL2A1-202ENST00000380518 IFT27Q9BW83 186 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 YTHDF1Q9BYJ9 559 aaKnown RBP15.72■□□□□ 0.11
COL2A1-202ENST00000380518 POLR2J2Q9GZM3 115 aaKnown RBP15.72■□□□□ 0.11
COL2A1-202ENST00000380518 SLC32A1Q9H598 525 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 FLRT1Q9NZU1 646 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 ALPPP05187 535 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 ALDH3A2P51648 485 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 GPX6P59796 221 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 USP43Q70EL4 1123 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 SH3RF2Q8TEC5 729 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 PIGKQ92643 395 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 GAL3ST4Q96RP7 486 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 GPR22Q99680 433 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms