RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 KRT6AP02538 564 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 KRT6BP04259 564 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 PCCBP05166 539 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 G6PDP11413 515 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 SLC2A4P14672 509 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 ANPEPP15144 967 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 CTHP32929 405 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 MAPK9P45984 424 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 KRT6CP48668 564 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 HMGCS1Q01581 520 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 IL23RQ5VWK5 629 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 PRAMEF9Q5VWM5 478 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 ZNF776Q68DI1 518 aaPredicted RBP19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 AGTRAPQ6RW13 159 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 CRTC3Q6UUV7 619 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 XKR5Q6UX68 686 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 HEATR4Q86WZ0 1026 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 NECTIN4Q96NY8 510 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 SLC39A3Q9BRY0 314 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 SPAG4Q9NPE6 437 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 STOX2Q9P2F5 926 aaPredicted RBP19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 EYSQ5T1H1 3165 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 KCNE1BA0A087WTH5 132 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 C17orf113A0A1B0GUU1 675 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 TCN1P20061 433 aaPredicted RBP19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 IL12AP29459 219 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 NTSR1P30989 418 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 GCKP35557 465 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 POLR2JP52435 117 aaKnown RBP19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 KCNK10P57789 538 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 RCAN2Q14206 197 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 GGTA1PQ4G0N0 100 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 TMEM196Q5HYL7 178 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 HOMEZQ8IX15 550 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 RGL4Q8IZJ4 473 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 L3MBTL4Q8NA19 623 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 FAM156AQ8NDB6 213 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 OR2T3Q8NH03 318 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 NRG4Q8WWG1 115 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 ATL1Q8WXF7 558 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 VPS33AQ96AX1 596 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 PKP4Q99569 1192 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 LGR4Q9BXB1 951 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 MKRN2Q9H000 416 aaKnown RBP19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 IL1RL2Q9HB29 575 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 C15orf41Q9Y2V0 281 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 PCYT1BQ9Y5K3 369 aaPredicted RBP19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 A0A1W2PP18 115 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 TRIM38O00635 465 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 C1orf105O95561 183 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 PDYNP01213 254 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 IMPG1Q17R60 797 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 PLA2G4EQ3MJ16 856 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 HABP4Q5JVS0 413 aaKnown RBP19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 COL13A1Q5TAT6 717 aaPredicted RBP19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 CYP20A1Q6UW02 462 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 C11orf96Q7Z7L8 435 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 THOC6Q86W42 341 aaKnown RBP19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 OR2L2Q8NH16 312 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 ANGPTL2Q9UKU9 493 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 PRKAB1Q9Y478 270 aa19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 POLR3HQ9Y535 204 aaPredicted RBP19.32■□□□□ 0.68
PDLIM5-205ENST00000380180 COL4A2P08572 1712 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 SLC16A8O95907 504 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 EGFP01133 1207 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 GNPDA1P46926 289 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 RPL38P63173 70 aaKnown RBP19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 CDK3Q00526 305 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 NAE1Q13564 534 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 FLOT2Q14254 428 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 NFE2L1Q14494 772 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 COQ5Q5HYK3 327 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 SDE2Q6IQ49 451 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 DOK6Q6PKX4 331 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 TRMT11Q7Z4G4 463 aaKnown RBP19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 KBTBD6Q86V97 674 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 IL17RCQ8NAC3 791 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 MED8Q96G25 268 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 GABRG3Q99928 467 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 MBNL1Q9NR56 388 aaKnown RBP19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 TMEM181Q9P2C4 612 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 SNX6Q9UNH7 406 aa19.31■□□□□ 0.68
PDLIM5-205ENST00000380180 FAM234BA2RU67 622 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 MGAT4DA6NG13 374 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 CCDC154A6NI56 674 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 SEC22BO75396 215 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 BAG2O95816 211 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 IMPA1P29218 277 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 HALP42357 657 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 NEK2P51955 445 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 CHIT1Q13231 466 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 AGERQ15109 404 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 PON2Q15165 354 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 LRRC74BQ6ZQY2 392 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 PPFIBP2Q8ND30 876 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 SELENOMQ8WWX9 145 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 GPATCH1Q9BRR8 931 aaKnown RBP19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 ACPTQ9BZG2 426 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 SLC6A17Q9H1V8 727 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 ACTL8Q9H568 366 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms