RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 PTGESO14684 152 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 ANKRD28O15084 1053 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 PCDHGA12O60330 932 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 ITGAMP11215 1152 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 CTSKP43235 329 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 ALFQ53S48 1182 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 CCDC71Q8IV32 467 aaPredicted RBP15.54■□□□□ 0.08
CKAP4-201ENST00000378026 P3H2Q8IVL5 708 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 FBLIM1Q8WUP2 373 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 PAAF1Q9BRP4 392 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 COPS4Q9BT78 406 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 ZNF236Q9UL36 1845 aa15.54■□□□□ 0.08
CKAP4-201ENST00000378026 NYNRINQ9P2P1 1898 aaKnown RBP15.53■□□□□ 0.08
CKAP4-201ENST00000378026 CASTOR2A6NHX0 329 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 CLDN24A6NM45 220 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 M0R082 166 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 C1QCP02747 245 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 DARSP14868 501 aaKnown RBP15.53■□□□□ 0.08
CKAP4-201ENST00000378026 RAP1GAP2Q684P5 730 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 GPR153Q6NV75 609 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 NRARPQ7Z6K4 114 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 GALNT7Q86SF2 657 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 CHPFQ8IZ52 775 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 CDKN2AIPNLQ96HQ2 116 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 B3GALT6Q96L58 329 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 CENPOQ9BU64 300 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 TNKS2Q9H2K2 1166 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 HEBP1Q9NRV9 189 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 KRT84Q9NSB2 600 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 RBPJLQ9UBG7 517 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 ACTL7AQ9Y615 435 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 CTDSP2O14595 271 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 PGRP06401 933 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 HTR3AP46098 478 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 SUOXP51687 545 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 CRISP3P54108 245 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 SPANXN2Q5MJ10 180 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 DEPDC4Q8N2C3 294 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 LIX1Q8N485 282 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 C3orf58Q8NDZ4 430 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 TRPM4Q8TD43 1214 aa15.53■□□□□ 0.08
CKAP4-201ENST00000378026 KCNE1P15382 129 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 PPP3CCP48454 512 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 DAB2P98082 770 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 CAPN13Q6MZZ7 669 aaPredicted RBP15.52■□□□□ 0.08
CKAP4-201ENST00000378026 SHQ1Q6PI26 577 aaKnown RBP15.52■□□□□ 0.08
CKAP4-201ENST00000378026 VTCN1Q7Z7D3 282 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 GPR149Q86SP6 731 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 OR4K2Q8NGD2 314 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 CITED4Q96RK1 184 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 GIMAP4Q9NUV9 329 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 ZNF451Q9Y4E5 1061 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 CENPBD1B2RD01 187 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 LOC110117498-PIK3R3F6TDL0 507 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 GPR39O43194 453 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 TLL1O43897 1013 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 WBP4O75554 376 aaKnown RBP15.52■□□□□ 0.08
CKAP4-201ENST00000378026 AZGP1P25311 298 aaKnown RBP15.52■□□□□ 0.08
CKAP4-201ENST00000378026 TUBA1BP68363 451 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 RPP38P78345 283 aaKnown RBP15.52■□□□□ 0.08
CKAP4-201ENST00000378026 ZNF544Q6NX49 715 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 TUBA1AQ71U36 451 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 HORMAD1Q86X24 394 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 KIAA1958Q8N8K9 716 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 ARRDC2Q8TBH0 407 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 CEP19Q96LK0 163 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 PRRG3Q9BZD7 231 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 IRF2BPLQ9H1B7 796 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 TMLHEQ9NVH6 421 aa15.52■□□□□ 0.08
CKAP4-201ENST00000378026 TRMT6Q9UJA5 497 aaKnown RBP15.52■□□□□ 0.08
CKAP4-201ENST00000378026 SAMHD1Q9Y3Z3 626 aaKnown RBP15.52■□□□□ 0.08
CKAP4-201ENST00000378026 RGS5O15539 181 aa15.52■□□□□ 0.07
CKAP4-201ENST00000378026 FKBP9O95302 570 aa15.52■□□□□ 0.07
CKAP4-201ENST00000378026 HOXA9P31269 272 aa15.52■□□□□ 0.07
CKAP4-201ENST00000378026 GDF5P43026 501 aa15.52■□□□□ 0.07
CKAP4-201ENST00000378026 ZNF45Q02386 682 aa15.52■□□□□ 0.07
CKAP4-201ENST00000378026 MADCAM1Q13477 382 aa15.52■□□□□ 0.07
CKAP4-201ENST00000378026 MANEALQ5VSG8 457 aa15.52■□□□□ 0.07
CKAP4-201ENST00000378026 TAPT1Q6NXT6 567 aa15.52■□□□□ 0.07
CKAP4-201ENST00000378026 PPTC7Q8NI37 304 aa15.52■□□□□ 0.07
CKAP4-201ENST00000378026 CDCA5Q96FF9 252 aa15.52■□□□□ 0.07
CKAP4-201ENST00000378026 ELP3Q9H9T3 547 aa15.52■□□□□ 0.07
CKAP4-201ENST00000378026 BPIFA1Q9NP55 256 aa15.52■□□□□ 0.07
CKAP4-201ENST00000378026 CCDC177Q9NQR7 707 aaPredicted RBP15.52■□□□□ 0.07
CKAP4-201ENST00000378026 BTBD3Q9Y2F9 522 aa15.52■□□□□ 0.07
CKAP4-201ENST00000378026 FNDC1Q4ZHG4 1894 aaPredicted RBP15.51■□□□□ 0.07
CKAP4-201ENST00000378026 DNAJC25-GNG10A0A024R161 153 aa15.51■□□□□ 0.07
CKAP4-201ENST00000378026 KRT87PA6NCN2 255 aa15.51■□□□□ 0.07
CKAP4-201ENST00000378026 STX16O14662 325 aa15.51■□□□□ 0.07
CKAP4-201ENST00000378026 MUSKO15146 869 aa15.51■□□□□ 0.07
CKAP4-201ENST00000378026 TLR5O60602 858 aa15.51■□□□□ 0.07
CKAP4-201ENST00000378026 SEC22BO75396 215 aa15.51■□□□□ 0.07
CKAP4-201ENST00000378026 CYP2C18P33260 490 aa15.51■□□□□ 0.07
CKAP4-201ENST00000378026 FADDQ13158 208 aa15.51■□□□□ 0.07
CKAP4-201ENST00000378026 KIAA0040Q15053 153 aa15.51■□□□□ 0.07
CKAP4-201ENST00000378026 DDR2Q16832 855 aa15.51■□□□□ 0.07
CKAP4-201ENST00000378026 RUNDC3AQ59EK9 446 aa15.51■□□□□ 0.07
CKAP4-201ENST00000378026 ZC3H12BQ5HYM0 836 aaKnown RBP15.51■□□□□ 0.07
CKAP4-201ENST00000378026 UBXN11Q5T124 520 aa15.51■□□□□ 0.07
CKAP4-201ENST00000378026 PIK3R6Q5UE93 754 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms