RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 MSH3P20585 1137 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 SPAM1P38567 509 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 PPP3CCP48454 512 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 COL9A2Q14055 689 aaPredicted RBP12.63□□□□□ -0.39
USP11-204ENST00000377107 PIWIL3Q7Z3Z3 882 aaKnown RBP12.63□□□□□ -0.39
USP11-204ENST00000377107 SNX29P2Q8IUI4 249 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 TMCO5AQ8N6Q1 288 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 DDHD1Q8NEL9 900 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 GLMNQ92990 594 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 LHPPQ9H008 270 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 CD320Q9NPF0 282 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 SH3BP4Q9P0V3 963 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 INPPL1O15357 1258 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 CREG1O75629 220 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 IGSF6O95976 241 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 GGT1P19440 569 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 FSHRP23945 695 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 IRF8Q02556 426 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 FAM26DQ5JW98 314 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 HORMAD1Q86X24 394 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 C10orf111Q8N326 155 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 C2orf73Q8N5S3 287 aaPredicted RBP12.63□□□□□ -0.39
USP11-204ENST00000377107 PIH1D2Q8WWB5 315 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 ELMO1Q92556 727 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 MRPS31Q92665 395 aaKnown RBP12.63□□□□□ -0.39
USP11-204ENST00000377107 MRPL9Q9BYD2 267 aaKnown RBP12.63□□□□□ -0.39
USP11-204ENST00000377107 KNL1Q8NG31 2342 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 SLC28A1O00337 649 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 URODP06132 367 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 CLCN4P51793 760 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 OCA2Q04671 838 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 PON2Q15165 354 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 MAPK11Q15759 364 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 CYP27C1Q4G0S4 372 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 VTCN1Q7Z7D3 282 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 TMEM132CQ8N3T6 1108 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 DRAXINQ8NBI3 349 aaPredicted RBP12.63□□□□□ -0.39
USP11-204ENST00000377107 OR7A2PQ8NGA2 310 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 FATE1Q969F0 183 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 RHBDF1Q96CC6 855 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 CORO1BQ9BR76 489 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 SLC25A37Q9NYZ2 338 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 MBD1Q9UIS9 605 aaPredicted RBP12.63□□□□□ -0.39
USP11-204ENST00000377107 PDE10AQ9Y233 779 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 ZNF451Q9Y4E5 1061 aa12.63□□□□□ -0.39
USP11-204ENST00000377107 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.62□□□□□ -0.39
USP11-204ENST00000377107 C16orf96A6NNT2 1141 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 BOLA2-SMG1P6H3BVE0 249 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 TRBC1P01850 177 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 COX7A2P14406 83 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 PFKLP17858 780 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 CDKN2CP42773 168 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 DGKEP52429 567 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 ARHGDIAP52565 204 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 RAD23AP54725 363 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 LMAN2Q12907 356 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 CHIT1Q13231 466 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 DGKKQ5KSL6 1271 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 TTC23Q5W5X9 447 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 TRAF7Q6Q0C0 670 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 Q6ZVU0 165 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 ADHFE1Q8IWW8 467 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 MICU2Q8IYU8 434 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 DUS3LQ96G46 650 aaKnown RBP12.62□□□□□ -0.39
USP11-204ENST00000377107 APIPQ96GX9 242 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 ZNF334Q9HCZ1 680 aaPredicted RBP12.62□□□□□ -0.39
USP11-204ENST00000377107 PRDM8Q9NQV8 689 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 SRRDQ9UH36 339 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 DOCK4Q8N1I0 1966 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 GNG14A0A1W2PPG7 69 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 AGRPO00253 132 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 SH3BP5O60239 455 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 PRR35P0CG20 571 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 RECQLP46063 649 aaPredicted RBP12.62□□□□□ -0.39
USP11-204ENST00000377107 CD47Q08722 323 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 BTG3Q14201 252 aaPredicted RBP12.62□□□□□ -0.39
USP11-204ENST00000377107 NR1D2Q14995 579 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 BORAQ6PGQ7 559 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 CRTC3Q6UUV7 619 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 ZDHHC21Q8IVQ6 265 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 NXPE1Q8N323 547 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 ARL10Q8N8L6 244 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 SLC22A17Q8WUG5 538 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 SORCS1Q8WY21 1168 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 KLF16Q9BXK1 252 aaPredicted RBP12.62□□□□□ -0.39
USP11-204ENST00000377107 ACPTQ9BZG2 426 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 MRPL17Q9NRX2 175 aaKnown RBP12.62□□□□□ -0.39
USP11-204ENST00000377107 FAM118AQ9NWS6 357 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 DNAJB9Q9UBS3 223 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 ACRV1P26436 265 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 HOXD10P28358 340 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 MAD2L1Q13257 205 aaPredicted RBP12.62□□□□□ -0.39
USP11-204ENST00000377107 MYBPC3Q14896 1274 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 PCBP2Q15366 365 aaKnown RBP eCLIP12.62□□□□□ -0.394e-7■■□□□ 14
USP11-204ENST00000377107 XKR6Q5GH73 641 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 COQ5Q5HYK3 327 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 FAM180BQ6P0A1 224 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 NECAB2Q7Z6G3 386 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 TMEM179BQ7Z7N9 219 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 ZSWIM9Q86XI8 627 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms