RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 UAP1L1Q3KQV9 507 aa20.64■□□□□ 0.9
HLA-C-201ENST00000376228 TBC1D3GQ6DHY5 549 aa20.64■□□□□ 0.9
HLA-C-201ENST00000376228 TBC1D3CQ6IPX1 549 aa20.64■□□□□ 0.9
HLA-C-201ENST00000376228 EFL1Q7Z2Z2 1120 aaKnown RBP20.64■□□□□ 0.9
HLA-C-201ENST00000376228 TREML1Q86YW5 311 aa20.64■□□□□ 0.9
HLA-C-201ENST00000376228 VRK3Q8IV63 474 aa20.64■□□□□ 0.9
HLA-C-201ENST00000376228 TBC1D3Q8IZP1 549 aaPredicted RBP20.64■□□□□ 0.9
HLA-C-201ENST00000376228 C1orf216Q8TAB5 229 aa20.64■□□□□ 0.9
HLA-C-201ENST00000376228 WDR55Q9H6Y2 383 aaPredicted RBP20.64■□□□□ 0.9
HLA-C-201ENST00000376228 EBF2Q9HAK2 575 aa20.64■□□□□ 0.9
HLA-C-201ENST00000376228 PDE10AQ9Y233 779 aa20.64■□□□□ 0.9
HLA-C-201ENST00000376228 CACNA1EQ15878 2313 aa20.64■□□□□ 0.89
HLA-C-201ENST00000376228 ZFC3H1O60293 1989 aaKnown RBP20.64■□□□□ 0.89
HLA-C-201ENST00000376228 PPP6CO00743 305 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 ARHGAP33O14559 1287 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 LIN7AO14910 233 aaPredicted RBP20.63■□□□□ 0.89
HLA-C-201ENST00000376228 TSPAN8P19075 237 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 PTPN4P29074 926 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 EPHA3P29320 983 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 PRDX6P30041 224 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 RPIAP49247 311 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 ATXN3P54252 364 aaPredicted RBP20.63■□□□□ 0.89
HLA-C-201ENST00000376228 GTF2H3Q13889 308 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 WSCD2Q2TBF2 565 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 TMEM259Q4ZIN3 620 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 UBE2R2Q712K3 238 aaPredicted RBP20.63■□□□□ 0.89
HLA-C-201ENST00000376228 SLC22A15Q8IZD6 547 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 BEND7Q8N7W2 519 aaPredicted RBP20.63■□□□□ 0.89
HLA-C-201ENST00000376228 TMEM159Q96B96 161 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 ORAI3Q9BRQ5 295 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 CD244Q9BZW8 370 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 ZNF385DQ9H6B1 395 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 PREBQ9HCU5 417 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 SEMA4BQ9NPR2 832 aaPredicted RBP20.63■□□□□ 0.89
HLA-C-201ENST00000376228 ARMCX1Q9P291 453 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 ATXN10Q9UBB4 475 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 TAGLN3Q9UI15 199 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 ZFR2Q9UPR6 939 aaKnown RBP20.63■□□□□ 0.89
HLA-C-201ENST00000376228 DNAJC15Q9Y5T4 150 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 GPR89AB7ZAQ6 455 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 PSIP1O75475 530 aaKnown RBP20.63■□□□□ 0.89
HLA-C-201ENST00000376228 GPR89BP0CG08 455 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 CYP2A7P20853 494 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 CD27P26842 260 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 TRIM23P36406 574 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 CSNK1EP49674 416 aaKnown RBP20.63■□□□□ 0.89
HLA-C-201ENST00000376228 HNMTP50135 292 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 GRIK2Q13002 908 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 CHSY3Q70JA7 882 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 CCT7Q99832 543 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 TMEM79Q9BSE2 394 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 TEX101Q9BY14 249 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 OR2AG1Q9H205 316 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 TM9SF3Q9HD45 589 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 ASB1Q9Y576 335 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 ST14Q9Y5Y6 855 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 DNMT3AQ9Y6K1 912 aaPredicted RBP20.63■□□□□ 0.89
HLA-C-201ENST00000376228 CAPN7Q9Y6W3 813 aa20.63■□□□□ 0.89
HLA-C-201ENST00000376228 ASCC3Q8N3C0 2202 aaKnown RBP20.63■□□□□ 0.89
HLA-C-201ENST00000376228 GOLGA8QA0A0J9YX86 632 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 GOLGA8OA6NCC3 632 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 GOLGA8NF8WBI6 632 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 CHUKO15111 745 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 HIST1H2AGP0C0S8 130 aaPredicted RBP20.62■□□□□ 0.89
HLA-C-201ENST00000376228 UROSP10746 265 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 ESRRAP11474 423 aaPredicted RBP20.62■□□□□ 0.89
HLA-C-201ENST00000376228 HIST1H2ADP20671 130 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 MAT2AP31153 395 aaKnown RBP20.62■□□□□ 0.89
HLA-C-201ENST00000376228 PIK3CGP48736 1102 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 GTF2H2Q13888 395 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 GTF2H2CQ6P1K8 395 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 MINDY1Q8N5J2 469 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 PLA2G15Q8NCC3 412 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 MCOLN3Q8TDD5 553 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 HIST1H2AHQ96KK5 128 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 SLC6A18Q96N87 628 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 HIST1H2AJQ99878 128 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 EGFL8Q99944 293 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 H2AFJQ9BTM1 129 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 PFDN4Q9NQP4 134 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 WWOXQ9NZC7 414 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 GULP1Q9UBP9 304 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 TSR3Q9UJK0 312 aaKnown RBP20.62■□□□□ 0.89
HLA-C-201ENST00000376228 ZNF225Q9UK10 706 aa20.62■□□□□ 0.89
HLA-C-201ENST00000376228 A0A1B0GVT2 93 aa20.61■□□□□ 0.89
HLA-C-201ENST00000376228 A0A1W2PPC4 97 aa20.61■□□□□ 0.89
HLA-C-201ENST00000376228 KLHL33A6NCF5 533 aa20.61■□□□□ 0.89
HLA-C-201ENST00000376228 TMEM202A6NGA9 273 aa20.61■□□□□ 0.89
HLA-C-201ENST00000376228 E9PBE3 544 aa20.61■□□□□ 0.89
HLA-C-201ENST00000376228 K7EPI3 171 aa20.61■□□□□ 0.89
HLA-C-201ENST00000376228 GIPC1O14908 333 aa20.61■□□□□ 0.89
HLA-C-201ENST00000376228 KLHL41O60662 606 aa20.61■□□□□ 0.89
HLA-C-201ENST00000376228 GUCA1CO95843 209 aa20.61■□□□□ 0.89
HLA-C-201ENST00000376228 SYPP08247 313 aa20.61■□□□□ 0.89
HLA-C-201ENST00000376228 NCF2P19878 526 aaPredicted RBP20.61■□□□□ 0.89
HLA-C-201ENST00000376228 IRX1P78414 480 aaPredicted RBP20.61■□□□□ 0.89
HLA-C-201ENST00000376228 CDK3Q00526 305 aa20.61■□□□□ 0.89
HLA-C-201ENST00000376228 BNC1Q01954 994 aa20.61■□□□□ 0.89
HLA-C-201ENST00000376228 UBAP2LQ14157 1087 aaKnown RBP20.61■□□□□ 0.89
HLA-C-201ENST00000376228 SYTL3Q4VX76 610 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms