RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 BAG5Q9UL15 447 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 OR51B4Q9Y5P0 310 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 TRBV5-3A0A0A0MS03 114 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 GLYATL1P3A0A0U1RQE8 302 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 TBKBP1A7MCY6 615 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 J3QRK9 145 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 CLPXO76031 633 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 CLDN9O95484 217 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 KRT6AP02538 564 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 KRT6BP04259 564 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 GSNP06396 782 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 BPIP17213 487 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 S100A3P33764 101 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 HNF1BP35680 557 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 NRIP1P48552 1158 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 KRT6CP48668 564 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 RPS14P62263 151 aaKnown RBP14.22□□□□□ -0.13
MSH5-201ENST00000375703 MACC1Q6ZN28 852 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 DET1Q7L5Y6 550 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 DCP2Q8IU60 420 aaKnown RBP14.22□□□□□ -0.13
MSH5-201ENST00000375703 ARL10Q8N8L6 244 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 DNAJB8Q8NHS0 232 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 UBTD2Q8WUN7 234 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 TRUB1Q8WWH5 349 aaKnown RBP14.22□□□□□ -0.13
MSH5-201ENST00000375703 FBXL8Q96CD0 374 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 FUNDC2Q9BWH2 189 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 RAD21L1Q9H4I0 556 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 RDH14Q9HBH5 336 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 PARVBQ9HBI1 364 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 ORC6Q9Y5N6 252 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 BRCA2P51587 3418 aa14.22□□□□□ -0.13
MSH5-201ENST00000375703 TRBV5-4A0A0C4DH59 114 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 FAM220BPB1ANY3 271 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 NBNO60934 754 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 TRBC1P01850 177 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 BMP1P13497 986 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 GKP32189 559 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 PLD1Q13393 1074 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 LAIR2Q6ISS4 152 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 METTL2BQ6P1Q9 378 aaKnown RBP14.21□□□□□ -0.13
MSH5-201ENST00000375703 GALNT18Q6P9A2 607 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 CRTC3Q6UUV7 619 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 CALHM3Q86XJ0 350 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 NAT16Q8N8M0 369 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 OR10Q1Q8NGQ4 319 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 PYURFQ96I23 114 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 NODALQ96S42 347 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 CCDC90BQ9GZT6 254 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 KCNH6Q9H252 994 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 SMAD6O43541 496 aaKnown RBP14.21□□□□□ -0.13
MSH5-201ENST00000375703 RECQL5O94762 991 aaPredicted RBP14.21□□□□□ -0.13
MSH5-201ENST00000375703 PDYNP01213 254 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 ANXA5P08758 320 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 MYCLP1P12525 358 aaPredicted RBP14.21□□□□□ -0.13
MSH5-201ENST00000375703 PFKLP17858 780 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 RAD23AP54725 363 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 CLDN8P56748 225 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 SMAD3P84022 425 aaKnown RBP14.21□□□□□ -0.13
MSH5-201ENST00000375703 CDH18Q13634 790 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 SPIDRQ14159 915 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 ZNF691Q5VV52 312 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 DCDC5Q6ZRR9 648 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 HIPK1Q86Z02 1210 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 C10orf111Q8N326 155 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 TMEM132CQ8N3T6 1108 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 WFDC5Q8TCV5 224 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 FKBP10Q96AY3 582 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 TMEM175Q9BSA9 504 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 HTATIP2Q9BUP3 242 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 ACPTQ9BZG2 426 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 RMND5AQ9H871 391 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 EXD2Q9NVH0 621 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 MTRRQ9UBK8 725 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 ZNF510Q9Y2H8 683 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 CORINQ9Y5Q5 1042 aa14.21□□□□□ -0.13
MSH5-201ENST00000375703 A0A096LPI6 279 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 OCM2P0CE71 109 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 OCMP0CE72 109 aaPredicted RBP14.21□□□□□ -0.14
MSH5-201ENST00000375703 SELPP16109 830 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 NR4A1P22736 598 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 RPIAP49247 311 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 GZMMP51124 257 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 PSMD7P51665 324 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 CAP1Q01518 475 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 DPY19L1Q2PZI1 675 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 PGS1Q32NB8 556 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 TTLL9Q3SXZ7 439 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 ANKRD46Q86W74 232 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 NPAS4Q8IUM7 802 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 PLPP6Q8IY26 295 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 ADGRG2Q8IZP9 1017 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 SELENOMQ8WWX9 145 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 ALG14Q96F25 216 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 ITCHQ96J02 903 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 ZIC5Q96T25 663 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 CPPED1Q9BRF8 314 aaPredicted RBP14.21□□□□□ -0.14
MSH5-201ENST00000375703 INPP5KQ9BT40 448 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 SLC29A3Q9BZD2 475 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 SERHLQ9NQF3 203 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 STOML2Q9UJZ1 356 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms