RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 PITPNAQ00169 270 aa20.77■□□□□ 0.92
TGFBR1-202ENST00000374994 ZNF678Q5SXM1 525 aa20.77■□□□□ 0.92
TGFBR1-202ENST00000374994 OR9I1Q8NGQ6 314 aa20.77■□□□□ 0.92
TGFBR1-202ENST00000374994 PYURFQ96I23 114 aa20.77■□□□□ 0.92
TGFBR1-202ENST00000374994 TTYH1Q9H313 450 aaPredicted RBP20.77■□□□□ 0.92
TGFBR1-202ENST00000374994 SMURF2Q9HAU4 748 aa20.77■□□□□ 0.92
TGFBR1-202ENST00000374994 SDHDO14521 159 aa20.77■□□□□ 0.92
TGFBR1-202ENST00000374994 MLLT6P55198 1093 aaPredicted RBP20.77■□□□□ 0.92
TGFBR1-202ENST00000374994 DSC3Q14574 896 aa20.77■□□□□ 0.92
TGFBR1-202ENST00000374994 C17orf50Q8WW18 174 aa20.77■□□□□ 0.92
TGFBR1-202ENST00000374994 EMID1Q96A84 441 aaPredicted RBP20.77■□□□□ 0.92
TGFBR1-202ENST00000374994 C11orf16Q9NQ32 467 aa20.77■□□□□ 0.92
TGFBR1-202ENST00000374994 SNNO75324 88 aaPredicted RBP20.77■□□□□ 0.91
TGFBR1-202ENST00000374994 SMPD1P17405 629 aa20.77■□□□□ 0.91
TGFBR1-202ENST00000374994 ITIH1P19827 911 aa20.77■□□□□ 0.91
TGFBR1-202ENST00000374994 ENTPD1P49961 510 aa20.77■□□□□ 0.91
TGFBR1-202ENST00000374994 RBM20Q5T481 1227 aaKnown RBP20.77■□□□□ 0.91
TGFBR1-202ENST00000374994 TMC8Q8IU68 726 aa20.77■□□□□ 0.91
TGFBR1-202ENST00000374994 SAMD14Q8IZD0 417 aaPredicted RBP20.77■□□□□ 0.91
TGFBR1-202ENST00000374994 PEX13Q92968 403 aa20.77■□□□□ 0.91
TGFBR1-202ENST00000374994 KCTD7Q96MP8 289 aa20.77■□□□□ 0.91
TGFBR1-202ENST00000374994 TM9SF3Q9HD45 589 aa20.77■□□□□ 0.91
TGFBR1-202ENST00000374994 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 J3QRK9 145 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 CDHR3Q6ZTQ4 885 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 FBXL8Q96CD0 374 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 EFCAB11Q9BUY7 163 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 FBXO10Q9UK96 956 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 PRR5P85299 388 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 SLC10A7Q0GE19 358 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 LINGO4Q6UY18 593 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 CILP2Q8IUL8 1156 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 GEMIN6Q8WXD5 167 aaKnown RBP20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 C1QTNF1Q9BXJ1 281 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 SMOC2Q9H3U7 446 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 SIX4Q9UIU6 781 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 PARP4Q9UKK3 1724 aaKnown RBP20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 STC1P52823 247 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 MXD1Q05195 221 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 SYT16Q17RD7 645 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 TLDC1Q6P9B6 456 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 SLC2A7Q6PXP3 512 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 KLRG2A4D1S0 409 aaPredicted RBP20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 H3BNH8 94 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 PITPNM1O00562 1244 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 RLN1P04808 185 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 IFNA16P05015 189 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 GSTM3P21266 225 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 THOC7Q6I9Y2 204 aaKnown RBP20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 C15orf39Q6ZRI6 1047 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 GSDMCQ9BYG8 508 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 MMP27Q9H306 513 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 SLC32A1Q9H598 525 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 ILVBLA1L0T0 632 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 CBSLP0DN79 551 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 CBSP35520 551 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 FNDC8Q8TC99 324 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 PPP1R14AQ96A00 147 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 GALPQ9UBC7 116 aa20.76■□□□□ 0.91
TGFBR1-202ENST00000374994 OR51F1A6NGY5 319 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 RASAL1O95294 804 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 SCARB2Q14108 478 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 DUOXA1Q1HG43 343 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 ATP13A5Q4VNC0 1218 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 CXorf57Q6NSI4 855 aaKnown RBP20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 ZNF248Q8NDW4 579 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 EXOSC8Q96B26 276 aaKnown RBP20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 VMP1Q96GC9 406 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 FBXL20Q96IG2 436 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 TSGA13Q96PP4 275 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 VPS29Q9UBQ0 182 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 DUSP11O75319 330 aaKnown RBP20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 USP2O75604 605 aaPredicted RBP20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 CREG1O75629 220 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 EPOP01588 193 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 GLDCP23378 1020 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 HTR1BP28222 390 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 KHKP50053 298 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 ARFIP1P53367 373 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 UFM1P61960 85 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 PHC1P78364 1004 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 XKR5Q6UX68 686 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 ZBED6CLQ96FA7 236 aaPredicted RBP20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 PRNPP04156 253 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 SAGP10523 405 aaPredicted RBP20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 CLK3P49761 638 aaKnown RBP20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 RANBP3LQ86VV4 465 aaPredicted RBP20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 SLITRK4Q8IW52 837 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 GPSM3Q9Y4H4 160 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 NIPSNAP2O75323 286 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 LDOC1O95751 146 aaPredicted RBP20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 POU2F1P14859 743 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 SEMA3AQ14563 771 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 TLR1Q15399 786 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 RPTNQ6XPR3 784 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 ANKFN1Q8N957 763 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 TOR3AQ9H497 397 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 TVP23BQ9NYZ1 205 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 SLC2A6Q9UGQ3 507 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms