RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 SCN3BQ9NY72 215 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 TPRKBQ9Y3C4 175 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 PCDHGA10Q9Y5H3 936 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 SPO11Q9Y5K1 396 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 FFAR3O14843 346 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 GPR42O15529 346 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 MT-ND2P03891 347 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 PKMP14618 531 aaKnown RBP10.86□□□□□ -0.67
CCDC40-203ENST00000374877 MAGP20916 626 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 OR1E1P30953 314 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 PBX3P40426 434 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 SLC11A1P49279 550 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 GATMP50440 423 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 CLCA4Q14CN2 919 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 SGO1Q5FBB7 561 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 SPANXN4Q5MJ08 99 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 FBXL22Q6P050 247 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 CCDC80Q76M96 950 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 LGI2Q8N0V4 545 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 DYNC2LI1Q8TCX1 351 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 RHBDF1Q96CC6 855 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 EXOC2Q96KP1 924 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 C1orf74Q96LT6 269 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 TRIT1Q9H3H1 467 aaKnown RBP10.86□□□□□ -0.67
CCDC40-203ENST00000374877 SCUBE2Q9NQ36 999 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 MARCH5Q9NX47 278 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 ABI2Q9NYB9 513 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-203ENST00000374877 TMEFF2Q9UIK5 374 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-203ENST00000374877 PCDHB14Q9Y5E9 798 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 MICAL3Q7RTP6 2002 aa10.86□□□□□ -0.67
CCDC40-203ENST00000374877 IQCF5A8MTL0 148 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 MYO1GB0I1T2 1018 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 ANKRD28O15084 1053 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 KLK8O60259 260 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 TBX18O95935 607 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 GALTP07902 379 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 ITGB8P26012 769 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 CD40LGP29965 261 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 RYKP34925 604 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 NKX2-5P52952 324 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-203ENST00000374877 SMN1Q16637 294 aaKnown RBP10.85□□□□□ -0.67
CCDC40-203ENST00000374877 AFTPHQ6ULP2 937 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 ARMC8Q8IUR7 673 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 CLHC1Q8NHS4 586 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 GTF2H4Q92759 462 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 PEX13Q92968 403 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 B3GALT6Q96L58 329 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 DPY30Q9C005 99 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 DSN1Q9H410 356 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 EHD1Q9H4M9 534 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 SPATA7Q9P0W8 599 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 FNIP2Q9P278 1114 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 PRG3Q9Y2Y8 225 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-203ENST00000374877 CREG1O75629 220 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 SCELO95171 688 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 TSPAN12O95859 305 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 DLGAP3O95886 979 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 MASP1P48740 699 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 IL10RBQ08334 325 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 SF3B4Q15427 424 aaKnown RBP eCLIP10.85□□□□□ -0.671e-7■■■■□ 25.6
CCDC40-203ENST00000374877 ZRANB3Q5FWF4 1079 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 PSAPL1Q6NUJ1 521 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 HIPK1Q86Z02 1210 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 PIANPQ8IYJ0 282 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 MICU2Q8IYU8 434 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 SETD9Q8NE22 299 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 MCFD2Q8NI22 146 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 TADA1Q96BN2 335 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 ZHX1-C8orf76Q96EF9 292 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 ZNF300Q96RE9 604 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-203ENST00000374877 SLC25A37Q9NYZ2 338 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 ERVK-11Q9UQG0 969 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 TLR6Q9Y2C9 796 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 CENPFP49454 3210 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 OR6C75A6NL08 312 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 TTC34A8MYJ7 566 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 TBX1O43435 398 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 NDST3O95803 873 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 GUCA1CO95843 209 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 CSF2RAP15509 400 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 HMGCS1Q01581 520 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 PPIGQ13427 754 aaKnown RBP eCLIP10.85□□□□□ -0.672e-6■■■□□ 15
CCDC40-203ENST00000374877 MRPL58Q14197 206 aaKnown RBP10.85□□□□□ -0.67
CCDC40-203ENST00000374877 RFX4Q33E94 735 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 UTS2BQ765I0 119 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 GOLGA7Q7Z5G4 137 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 KRTCAP2Q8N6L1 136 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 POC5Q8NA72 575 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 PHF10Q8WUB8 498 aaKnown RBP10.85□□□□□ -0.67
CCDC40-203ENST00000374877 ZNF689Q96CS4 500 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-203ENST00000374877 LGALS12Q96DT0 336 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 YIPF6Q96EC8 236 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 BARD1Q99728 777 aaKnown RBP10.85□□□□□ -0.67
CCDC40-203ENST00000374877 RC3H2Q9HBD1 1191 aaKnown RBP10.85□□□□□ -0.67
CCDC40-203ENST00000374877 BPIFA1Q9NP55 256 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 NLE1Q9NVX2 485 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-203ENST00000374877 SLCO3A1Q9UIG8 710 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 EIF3LQ9Y262 564 aaKnown RBP10.85□□□□□ -0.67
CCDC40-203ENST00000374877 GMPPBQ9Y5P6 360 aa10.85□□□□□ -0.67
CCDC40-203ENST00000374877 F8W810 466 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms