RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 CCDC33Q8N5R6 958 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 NPWQ8N729 165 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 CCNYQ8ND76 341 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 OR6Y1Q8NGX8 325 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 DQX1Q8TE96 717 aaKnown RBP4.78□□□□□ -1.64
USP48-202ENST00000374730 SMG7Q92540 1137 aaKnown RBP4.78□□□□□ -1.64
USP48-202ENST00000374730 C1GALT1C1Q96EU7 318 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 RBBP8Q99708 897 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 MLPHQ9BV36 600 aaPredicted RBP4.78□□□□□ -1.64
USP48-202ENST00000374730 MECRQ9BV79 373 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 PTDSS2Q9BVG9 487 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 COLEC11Q9BWP8 271 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 CADM1Q9BY67 442 aaKnown RBP4.78□□□□□ -1.64
USP48-202ENST00000374730 SEMA4CQ9C0C4 833 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 NMUR2Q9GZQ4 415 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 IL22Q9GZX6 179 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 TKTL2Q9H0I9 626 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 DMAP1Q9NPF5 467 aaPredicted RBP4.78□□□□□ -1.64
USP48-202ENST00000374730 FBXO6Q9NRD1 293 aaPredicted RBP4.78□□□□□ -1.64
USP48-202ENST00000374730 SNX15Q9NRS6 342 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 TRMT13Q9NUP7 481 aaKnown RBP4.78□□□□□ -1.64
USP48-202ENST00000374730 TMEM30AQ9NV96 361 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 ARL8BQ9NVJ2 186 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 MIOSQ9NXC5 875 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 ARHGEF38Q9NXL2 777 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 NSMCE4AQ9NXX6 385 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 BFARQ9NZS9 450 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 COX16Q9P0S2 106 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 SEPT10Q9P0V9 454 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 FNIP2Q9P278 1114 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 TXNDC16Q9P2K2 825 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 MID2Q9UJV3 735 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 VANGL2Q9ULK5 521 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 NEU3Q9UQ49 428 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 FAM50BQ9Y247 325 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 L3MBTL1Q9Y468 752 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 SQORQ9Y6N5 450 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 ANKRD36A6QL64 1941 aa4.78□□□□□ -1.64
USP48-202ENST00000374730 TTC3P53804 2025 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.77□□□□□ -1.65
USP48-202ENST00000374730 A0A0U1RQF3 1178 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 ZCWPW2A0A1B0GU75 182 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 CASTOR2A6NHX0 329 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 ARHGAP42A6NI28 874 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 TMEM114B3SHH9 223 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 PRRT4C9JH25 899 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 H0YIZ8 118 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 KCNK1O00180 336 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 GYG2O15488 501 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 IRAK2O43187 625 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 SEPT4O43236 478 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 MAGEC1O60732 1142 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 JTBO76095 146 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 APOA4P06727 396 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 GRPP07492 148 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 TPBGLP0DKB5 382 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 SRGAP2BP0DMP2 458 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 GM2AP17900 193 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 GNAZP19086 355 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 HDCP19113 662 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 AOC1P19801 751 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 CCNCP24863 283 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 CST5P28325 142 aaPredicted RBP4.77□□□□□ -1.65
USP48-202ENST00000374730 ELF1P32519 619 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 GCKP35557 465 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 KCNJ5P48544 419 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 POLD2P49005 469 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 PXNP49023 591 aaPredicted RBP4.77□□□□□ -1.65
USP48-202ENST00000374730 HARS2P49590 506 aaKnown RBP4.77□□□□□ -1.65
USP48-202ENST00000374730 RAP1GDS1P52306 607 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 PRKAA2P54646 552 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 AQP5P55064 265 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 RPL10AP62906 217 aaKnown RBP4.77□□□□□ -1.65
USP48-202ENST00000374730 CRADDP78560 199 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 PDE1BQ01064 536 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 TSPY1Q01534 308 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 CDH17Q12864 832 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 ZBTB17Q13105 803 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 PRPSAP1Q14558 356 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 ACCSLQ4AC99 568 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 DNAL1Q4LDG9 190 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 ANKRD20A4Q4UJ75 823 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 KHDC1LQ5JSQ8 128 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 RABGAP1LQ5R372 815 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 MFSD14CQ5VZR4 134 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 BSPRYQ5W0U4 402 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 PDPK2PQ6A1A2 396 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 NAPEPLDQ6IQ20 393 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 MSANTD2Q6P1R3 559 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 CXCL17Q6UXB2 119 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 SLC29A4Q7RTT9 530 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 MAVSQ7Z434 540 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 LINC00523Q86TU6 105 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 CNTN4Q8IWV2 1026 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 ARHGAP12Q8IWW6 846 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.77□□□□□ -1.65
USP48-202ENST00000374730 DCLK2Q8N568 766 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 TEX9Q8N6V9 391 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 MAB21L3Q8N8X9 362 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 OR52K1Q8NGK4 314 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms